Genome Details
Selected Rep_genome_ID: AG400_49
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides gordonii
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG400_49 | 6,542,195 | 99.62% | 0.9% | NA | Africa | H3AfricaPhase2 |
| CGMR016059 | 5,790,856 | 96.54% | 0.38% | China | Asia | CGMR |
| CGMR052860 | 5,632,758 | 93.3% | 3.08% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| AG400_49_CGC25 | CGCFAM_01022 | Yes | 7 | 2 | |
| AG400_49_CGC2 | CGCFAM_01173 | Yes | 16 | 4 | |
| AG400_49_CGC8 | CGCFAM_01174 | Yes | 3 | 1 | |
| AG400_49_CGC11 | CGCFAM_01375 | Yes | 6 | 2 | |
| AG400_49_CGC120 | CGCFAM_01375 | Yes | 6 | 2 | |
| AG400_49_CGC71 | CGCFAM_01375 | Yes | 8 | 4 | |
| AG400_49_CGC118 | CGCFAM_01377 | Yes | 3 | 1 | |
| AG400_49_CGC75 | CGCFAM_01381 | Yes | 8 | 3 | |
| AG400_49_CGC28 | CGCFAM_01472 | Yes | 7 | 5 | |
| AG400_49_CGC40 | CGCFAM_01656 | Yes | 3 | 1 | |
| AG400_49_CGC80 | CGCFAM_01970 | Yes | 3 | 1 | |
| AG400_49_CGC110 | CGCFAM_02027 | Yes | 4 | 1 | |
| AG400_49_CGC76 | CGCFAM_02028 | Yes | 17 | 5 | |
| AG400_49_CGC96 | CGCFAM_02030 | Yes | 10 | 3 | |
| AG400_49_CGC106 | CGCFAM_02409 | Yes | 3 | 2 | |
| AG400_49_CGC67 | CGCFAM_02468 | Yes | 3 | 2 | |
| AG400_49_CGC100 | CGCFAM_02537 | Yes | 13 | 8 | |
| AG400_49_CGC109 | CGCFAM_02540 | Yes | 8 | 1 | |
| AG400_49_CGC65 | CGCFAM_02544 | Yes | 19 | 4 | |
| AG400_49_CGC87 | CGCFAM_03207 | Yes | 5 | 1 | |
| AG400_49_CGC103 | CGCFAM_03311 | Yes | 10 | 1 | |
| AG400_49_CGC17 | CGCFAM_03315 | Yes | 10 | 4 | |
| AG400_49_CGC32 | CGCFAM_03316 | Yes | 3 | 2 | |
| AG400_49_CGC36 | CGCFAM_03317 | Yes | 3 | 1 | |
| AG400_49_CGC66 | CGCFAM_03320 | Yes | 12 | 5 |
Top CAZyme Families