Cluster: AG400_49_CGC65
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 4
- Substrate:
- Genome ID: AG400_49
- CGC Family ID: CGCFAM_02544
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_45457 | k141_45457_19 | 25397 | 27553 | + | 1.B.14.2.9 |
| pfam | k141_45457 | k141_45457_20 | 27550 | 28017 | + | DUF4625 |
| CAZyme | k141_45457 | k141_45457_21 | 28096 | 29463 | - | GH177 |
| CAZyme | k141_45457 | k141_45457_22 | 29476 | 31056 | - | GH20 |
| pfam | k141_45457 | k141_45457_23 | 31083 | 32933 | - | SusD_RagB | SusD-like_3 |
| TC | k141_45457 | k141_45457_24 | 32961 | 36131 | - | 1.B.14.6.1 |
| pfam | k141_45457 | k141_45457_25 | 36150 | 37157 | - | GFO_IDH_MocA |
| pfam | k141_45457 | k141_45457_26 | 37181 | 37963 | - | Glucosamine_iso |
| TC | k141_45457 | k141_45457_27 | 38116 | 39432 | - | 2.A.1.7.9 |
| CAZyme | k141_45457 | k141_45457_28 | 39429 | 40769 | - | GH177 |
| CAZyme | k141_45457 | k141_45457_29 | 40902 | 42119 | - | CE9 |
| TF | k141_45457 | k141_45457_30 | 42242 | 43405 | - | HTH_AraC |
| TC | k141_45457 | k141_45457_31 | 43662 | 46949 | + | 1.B.14.6.4 |
| pfam | k141_45457 | k141_45457_32 | 46962 | 48287 | - | OEP | OEP |
| TC | k141_45457 | k141_45457_33 | 48299 | 51328 | - | 2.A.6.2.33 |
| TC | k141_45457 | k141_45457_34 | 51337 | 52434 | - | 2.A.6.2.28 |
| pfam | k141_45457 | k141_45457_35 | 53691 | 57533 | + | DUF6383 |
| TC | k141_45457 | k141_45457_36 | 57765 | 58316 | - | 2.A.51.1.6 |
| TC | k141_45457 | k141_45457_37 | 58318 | 58848 | - | 2.A.51.1.6 |
Gene ID: k141_45457_19
Type: TC
Location: 25397 - 27553 (+)
Type: TC
Location: 25397 - 27553 (+)
Gene ID: k141_45457_20
Type: pfam
Location: 27550 - 28017 (+)
Type: pfam
Location: 27550 - 28017 (+)
Gene ID: k141_45457_21
Type: CAZyme
Location: 28096 - 29463 (-)
Type: CAZyme
Location: 28096 - 29463 (-)
Gene ID: k141_45457_22
Type: CAZyme
Location: 29476 - 31056 (-)
Type: CAZyme
Location: 29476 - 31056 (-)
Gene ID: k141_45457_23
Type: pfam
Location: 31083 - 32933 (-)
Type: pfam
Location: 31083 - 32933 (-)
Gene ID: k141_45457_24
Type: TC
Location: 32961 - 36131 (-)
Type: TC
Location: 32961 - 36131 (-)
Gene ID: k141_45457_25
Type: pfam
Location: 36150 - 37157 (-)
Type: pfam
Location: 36150 - 37157 (-)
Gene ID: k141_45457_26
Type: pfam
Location: 37181 - 37963 (-)
Type: pfam
Location: 37181 - 37963 (-)
Gene ID: k141_45457_27
Type: TC
Location: 38116 - 39432 (-)
Type: TC
Location: 38116 - 39432 (-)
Gene ID: k141_45457_28
Type: CAZyme
Location: 39429 - 40769 (-)
Type: CAZyme
Location: 39429 - 40769 (-)
Gene ID: k141_45457_29
Type: CAZyme
Location: 40902 - 42119 (-)
Type: CAZyme
Location: 40902 - 42119 (-)
Gene ID: k141_45457_30
Type: TF
Location: 42242 - 43405 (-)
Type: TF
Location: 42242 - 43405 (-)
Gene ID: k141_45457_31
Type: TC
Location: 43662 - 46949 (+)
Type: TC
Location: 43662 - 46949 (+)
Gene ID: k141_45457_32
Type: pfam
Location: 46962 - 48287 (-)
Type: pfam
Location: 46962 - 48287 (-)
Gene ID: k141_45457_33
Type: TC
Location: 48299 - 51328 (-)
Type: TC
Location: 48299 - 51328 (-)
Gene ID: k141_45457_34
Type: TC
Location: 51337 - 52434 (-)
Type: TC
Location: 51337 - 52434 (-)
Gene ID: k141_45457_35
Type: pfam
Location: 53691 - 57533 (+)
Type: pfam
Location: 53691 - 57533 (+)
Gene ID: k141_45457_36
Type: TC
Location: 57765 - 58316 (-)
Type: TC
Location: 57765 - 58316 (-)
Gene ID: k141_45457_37
Type: TC
Location: 58318 - 58848 (-)
Type: TC
Location: 58318 - 58848 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides gordonii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_45457_34 | vegetarian > omnivore | 1.10388 | 0.00290 |
| k141_45457_34 | vegetarian > vegan | 1.61413 | 0.00566 |
| k141_45457_36 | vegetarian > omnivore | 1.98001 | 0.00290 |
| k141_45457_36 | vegetarian > vegan | 1.00512 | 0.02197 |