Cluster: AG400_49_CGC76
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 5
- Substrate:
- Genome ID: AG400_49
- CGC Family ID: CGCFAM_02028
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_163416 | k141_163416_210 | 268624 | 269481 | + | 2.A.64.1.3 |
| STP | k141_163416 | k141_163416_211 | 269627 | 269920 | + | NTP_transf_2 |
| pfam | k141_163416 | k141_163416_212 | 269913 | 270281 | + | HepT-like |
| CAZyme | k141_163416 | k141_163416_213 | 270366 | 272582 | + | GH92 |
| peptidase | k141_163416 | k141_163416_214 | 272690 | 273688 | + | T02.UPW |
| CAZyme | k141_163416 | k141_163416_215 | 273696 | 274562 | - | CE1 |
| NULL(UNKNOWN) | k141_163416 | k141_163416_216 | 274615 | 274704 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_163416 | k141_163416_217 | 274711 | 276972 | + | 2.A.37.1.5 |
| pfam | k141_163416 | k141_163416_218 | 277076 | 277900 | + | DUF5032 |
| CAZyme | k141_163416 | k141_163416_219 | 278080 | 279246 | + | PL38 |
| CAZyme | k141_163416 | k141_163416_220 | 279283 | 280533 | + | GH88 |
| CAZyme | k141_163416 | k141_163416_221 | 280590 | 283058 | + | GH2 |
| NULL(UNKNOWN) | k141_163416 | k141_163416_222 | 283445 | 283810 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | k141_163416 | k141_163416_223 | 283821 | 287918 | + | HTH_AraC |
| TC | k141_163416 | k141_163416_224 | 288088 | 291225 | + | 1.B.14.6.1 |
| pfam | k141_163416 | k141_163416_225 | 291250 | 292725 | + | SusD_RagB | SusD-like_3 |
| TC | k141_163416 | k141_163416_226 | 292900 | 296889 | + | 9.A.25.1.1 |
Gene ID: k141_163416_210
Type: TC
Location: 268624 - 269481 (+)
Type: TC
Location: 268624 - 269481 (+)
Gene ID: k141_163416_211
Type: STP
Location: 269627 - 269920 (+)
Type: STP
Location: 269627 - 269920 (+)
Gene ID: k141_163416_212
Type: pfam
Location: 269913 - 270281 (+)
Type: pfam
Location: 269913 - 270281 (+)
Gene ID: k141_163416_213
Type: CAZyme
Location: 270366 - 272582 (+)
Type: CAZyme
Location: 270366 - 272582 (+)
Gene ID: k141_163416_214
Type: peptidase
Location: 272690 - 273688 (+)
Type: peptidase
Location: 272690 - 273688 (+)
Gene ID: k141_163416_215
Type: CAZyme
Location: 273696 - 274562 (-)
Type: CAZyme
Location: 273696 - 274562 (-)
Gene ID: k141_163416_216
Type:
Location: 274615 - 274704 (+)
Type:
Location: 274615 - 274704 (+)
Gene ID: k141_163416_217
Type: TC
Location: 274711 - 276972 (+)
Type: TC
Location: 274711 - 276972 (+)
Gene ID: k141_163416_218
Type: pfam
Location: 277076 - 277900 (+)
Type: pfam
Location: 277076 - 277900 (+)
Gene ID: k141_163416_219
Type: CAZyme
Location: 278080 - 279246 (+)
Type: CAZyme
Location: 278080 - 279246 (+)
Gene ID: k141_163416_220
Type: CAZyme
Location: 279283 - 280533 (+)
Type: CAZyme
Location: 279283 - 280533 (+)
Gene ID: k141_163416_221
Type: CAZyme
Location: 280590 - 283058 (+)
Type: CAZyme
Location: 280590 - 283058 (+)
Gene ID: k141_163416_222
Type:
Location: 283445 - 283810 (+)
Type:
Location: 283445 - 283810 (+)
Gene ID: k141_163416_223
Type: TF
Location: 283821 - 287918 (+)
Type: TF
Location: 283821 - 287918 (+)
Gene ID: k141_163416_224
Type: TC
Location: 288088 - 291225 (+)
Type: TC
Location: 288088 - 291225 (+)
Gene ID: k141_163416_225
Type: pfam
Location: 291250 - 292725 (+)
Type: pfam
Location: 291250 - 292725 (+)
Gene ID: k141_163416_226
Type: TC
Location: 292900 - 296889 (+)
Type: TC
Location: 292900 - 296889 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides gordonii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.