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Cluster: AG400_49_CGC66

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_45457 k141_45457_60 86892 90233 + 1.B.14.6.1
TC k141_45457 k141_45457_61 90246 91784 + 8.A.46.1.5
CAZyme k141_45457 k141_45457_62 92004 93962 + GH136
CAZyme k141_45457 k141_45457_63 93966 96116 + GH50
pfam k141_45457 k141_45457_64 96141 99476 + TPR_8 | TPR_8 | TPR_16 | DUF5107
CAZyme k141_45457 k141_45457_65 99563 101971 + GH2
CAZyme k141_45457 k141_45457_66 102089 103699 + GH31_19
CAZyme k141_45457 k141_45457_67 103817 105985 - GH89
STP k141_45457 k141_45457_68 106416 107030 + Sigma70_r2 | Sigma70_r4_2
STP k141_45457 k141_45457_69 107292 108290 + FecR
TC k141_45457 k141_45457_70 108340 111588 + 1.B.14.6.1
TC k141_45457 k141_45457_71 111607 113154 + 8.A.46.1.3
Gene ID: k141_45457_60
Type: TC
Location: 86892 - 90233 (+)
Gene ID: k141_45457_61
Type: TC
Location: 90246 - 91784 (+)
Gene ID: k141_45457_62
Type: CAZyme
Location: 92004 - 93962 (+)
Gene ID: k141_45457_63
Type: CAZyme
Location: 93966 - 96116 (+)
Gene ID: k141_45457_64
Type: pfam
Location: 96141 - 99476 (+)
Gene ID: k141_45457_65
Type: CAZyme
Location: 99563 - 101971 (+)
Gene ID: k141_45457_66
Type: CAZyme
Location: 102089 - 103699 (+)
Gene ID: k141_45457_67
Type: CAZyme
Location: 103817 - 105985 (-)
Gene ID: k141_45457_68
Type: STP
Location: 106416 - 107030 (+)
Gene ID: k141_45457_69
Type: STP
Location: 107292 - 108290 (+)
Gene ID: k141_45457_70
Type: TC
Location: 108340 - 111588 (+)
Gene ID: k141_45457_71
Type: TC
Location: 111607 - 113154 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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