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Cluster: AG400_49_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_21495 k141_21495_73 81377 82324 + 2.A.19.5.2
pfam k141_21495 k141_21495_74 82414 83118 + DUF5020
TC k141_21495 k141_21495_75 83129 84424 + 2.A.40.7.6
peptidase k141_21495 k141_21495_76 84513 86555 - M13.017
CAZyme k141_21495 k141_21495_77 86712 89051 + GH35
TF k141_21495 k141_21495_78 89173 89622 - HTH_3
pfam k141_21495 k141_21495_79 90285 91103 + DUF6261
CAZyme k141_21495 k141_21495_80 91319 92731 + GH27
CAZyme k141_21495 k141_21495_81 92751 95249 + GH51_2
CAZyme k141_21495 k141_21495_82 95254 96792 + GH51_1
Gene ID: k141_21495_73
Type: TC
Location: 81377 - 82324 (+)
Gene ID: k141_21495_74
Type: pfam
Location: 82414 - 83118 (+)
Gene ID: k141_21495_75
Type: TC
Location: 83129 - 84424 (+)
Gene ID: k141_21495_76
Type: peptidase
Location: 84513 - 86555 (-)
Gene ID: k141_21495_77
Type: CAZyme
Location: 86712 - 89051 (+)
Gene ID: k141_21495_78
Type: TF
Location: 89173 - 89622 (-)
Gene ID: k141_21495_79
Type: pfam
Location: 90285 - 91103 (+)
Gene ID: k141_21495_80
Type: CAZyme
Location: 91319 - 92731 (+)
Gene ID: k141_21495_81
Type: CAZyme
Location: 92751 - 95249 (+)
Gene ID: k141_21495_82
Type: CAZyme
Location: 95254 - 96792 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_21495_74 vegetarian > omnivore 1.09645 0.00290

🧭 Explore Read Mapping of CGC

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