Genome Details
Selected Rep_genome_ID: A111.bin_3
Total Genomes Found: 9
Total Genomes Found: 9
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter lactaris
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A111.bin_3 | 2,801,437 | 99.42% | 0% | China(Inner Mongolia) | Asia | IMGG |
| CGMR069244 | 2,466,424 | 98.25% | 0% | China | Asia | CGMR |
| Rep_2280 | 2,903,846 | 99.4152% | 0% | NA | NA | WIS |
| SPMP30_bin.169 | 2,194,332 | 90.53% | 0% | Singapore | Asia | SPMP |
| SPMP49_bin.90 | 2,397,506 | 91.23% | 0% | Singapore | Asia | SPMP |
| SPMP72_bin.21 | 2,449,264 | 98.83% | 0.05% | Singapore | Asia | SPMP |
| SPMP76_bin.14 | 2,120,144 | 91.5% | 0.29% | Singapore | Asia | SPMP |
| SPMP84_bin.9 | 2,478,728 | 94.36% | 0.08% | Singapore | Asia | SPMP |
| SW065_88 | 2,348,435 | 98.83% | 0% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| A111.bin_3_CGC10 | CGCFAM_00002 | Yes | 9 | 5 | |
| A111.bin_3_CGC8 | CGCFAM_00005 | Yes | 4 | 3 | |
| A111.bin_3_CGC6 | CGCFAM_00057 | Yes | 4 | 1 | |
| A111.bin_3_CGC2 | CGCFAM_00067 | Yes | 5 | 2 | galactan |
| A111.bin_3_CGC9 | CGCFAM_00073 | Yes | 7 | 3 | |
| A111.bin_3_CGC14 | CGCFAM_00453 | Yes | 7 | 2 | |
| A111.bin_3_CGC7 | CGCFAM_00454 | Yes | 3 | 1 | |
| A111.bin_3_CGC22 | CGCFAM_01515 | Yes | 3 | 1 | |
| A111.bin_3_CGC11 | CGCFAM_02318 | Yes | 4 | 1 | |
| A111.bin_3_CGC16 | CGCFAM_02985 | Yes | 8 | 1 | |
| A111.bin_3_CGC3 | CGCFAM_06536 | Yes | 8 | 1 | |
| A111.bin_3_CGC4 | CGCFAM_06537 | Yes | 4 | 2 | |
| A111.bin_3_CGC5 | CGCFAM_06538 | Yes | 4 | 1 |
Top CAZyme Families