Cluster: A111.bin_3_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: A111.bin_3
- CGC Family ID: CGCFAM_00073
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A111_contig_35 | A111_contig_35_972 | 1071709 | 1072743 | - | GT2 |
| CAZyme | A111_contig_35 | A111_contig_35_973 | 1072752 | 1075454 | - | GT2 | GT4 |
| TC | A111_contig_35 | A111_contig_35_974 | 1075487 | 1076242 | - | 3.A.1.103.5 |
| TC | A111_contig_35 | A111_contig_35_975 | 1076254 | 1077045 | - | 3.A.1.103.6 |
| pfam | A111_contig_35 | A111_contig_35_976 | 1077170 | 1077595 | - | GtrA_DPMS_TM |
| pfam | A111_contig_35 | A111_contig_35_977 | 1077596 | 1078918 | - | DUF6056 |
| CAZyme | A111_contig_35 | A111_contig_35_978 | 1078946 | 1079890 | - | GT2 |
Gene ID: A111_contig_35_972
Type: CAZyme
Location: 1071709 - 1072743 (-)
Type: CAZyme
Location: 1071709 - 1072743 (-)
Gene ID: A111_contig_35_973
Type: CAZyme
Location: 1072752 - 1075454 (-)
Type: CAZyme
Location: 1072752 - 1075454 (-)
Gene ID: A111_contig_35_974
Type: TC
Location: 1075487 - 1076242 (-)
Type: TC
Location: 1075487 - 1076242 (-)
Gene ID: A111_contig_35_975
Type: TC
Location: 1076254 - 1077045 (-)
Type: TC
Location: 1076254 - 1077045 (-)
Gene ID: A111_contig_35_976
Type: pfam
Location: 1077170 - 1077595 (-)
Type: pfam
Location: 1077170 - 1077595 (-)
Gene ID: A111_contig_35_977
Type: pfam
Location: 1077596 - 1078918 (-)
Type: pfam
Location: 1077596 - 1078918 (-)
Gene ID: A111_contig_35_978
Type: CAZyme
Location: 1078946 - 1079890 (-)
Type: CAZyme
Location: 1078946 - 1079890 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter lactaris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.