Cluster: A111.bin_3_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: galactan
- Genome ID: A111.bin_3
- CGC Family ID: CGCFAM_00067
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A111_contig_35 | A111_contig_35_123 | 147531 | 148814 | + | 3.A.1.1.28 |
| TC | A111_contig_35 | A111_contig_35_124 | 148818 | 149708 | + | 3.A.1.1.28 |
| TC | A111_contig_35 | A111_contig_35_125 | 149708 | 150550 | + | 3.A.1.1.28 |
| CAZyme | A111_contig_35 | A111_contig_35_126 | 150588 | 152765 | + | GH36 |
| CAZyme | A111_contig_35 | A111_contig_35_127 | 152767 | 155037 | + | GH13_18 |
Gene ID: A111_contig_35_123
Type: TC
Location: 147531 - 148814 (+)
Type: TC
Location: 147531 - 148814 (+)
Gene ID: A111_contig_35_124
Type: TC
Location: 148818 - 149708 (+)
Type: TC
Location: 148818 - 149708 (+)
Gene ID: A111_contig_35_125
Type: TC
Location: 149708 - 150550 (+)
Type: TC
Location: 149708 - 150550 (+)
Gene ID: A111_contig_35_126
Type: CAZyme
Location: 150588 - 152765 (+)
Type: CAZyme
Location: 150588 - 152765 (+)
Gene ID: A111_contig_35_127
Type: CAZyme
Location: 152767 - 155037 (+)
Type: CAZyme
Location: 152767 - 155037 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter lactaris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.