Cluster: A111.bin_3_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: A111.bin_3
- CGC Family ID: CGCFAM_00454
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A111_contig_35 | A111_contig_35_430 | 505260 | 505961 | + | 3.A.1.122.14 |
| pfam | A111_contig_35 | A111_contig_35_431 | 505954 | 508446 | + | FtsX | FtsX |
| CAZyme | A111_contig_35 | A111_contig_35_432 | 508533 | 509483 | + | GT2 |
Gene ID: A111_contig_35_430
Type: TC
Location: 505260 - 505961 (+)
Type: TC
Location: 505260 - 505961 (+)
Gene ID: A111_contig_35_431
Type: pfam
Location: 505954 - 508446 (+)
Type: pfam
Location: 505954 - 508446 (+)
Gene ID: A111_contig_35_432
Type: CAZyme
Location: 508533 - 509483 (+)
Type: CAZyme
Location: 508533 - 509483 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter lactaris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A111_contig_35_431 | vegan > omnivore | 1.71149 | 0.04642 |