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Cluster: A111.bin_3_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A111_contig_35 A111_contig_35_1206 1338111 1339040 - GH25
pfam A111_contig_35 A111_contig_35_1207 1339549 1340163 + Lipase_GDSL | Lipase_GDSL_2
CAZyme A111_contig_35 A111_contig_35_1208 1340331 1342013 - GH13_31
TC A111_contig_35 A111_contig_35_1209 1342006 1342422 - 4.A.6.1.19
TC A111_contig_35 A111_contig_35_1210 1342442 1343317 - 4.A.6.1.13
TC A111_contig_35 A111_contig_35_1211 1343310 1344104 - 4.A.6.1.13
TC A111_contig_35 A111_contig_35_1212 1344178 1344636 - 4.A.6.1.13
Gene ID: A111_contig_35_1206
Type: CAZyme
Location: 1338111 - 1339040 (-)
Gene ID: A111_contig_35_1207
Type: pfam
Location: 1339549 - 1340163 (+)
Gene ID: A111_contig_35_1208
Type: CAZyme
Location: 1340331 - 1342013 (-)
Gene ID: A111_contig_35_1209
Type: TC
Location: 1342006 - 1342422 (-)
Gene ID: A111_contig_35_1210
Type: TC
Location: 1342442 - 1343317 (-)
Gene ID: A111_contig_35_1211
Type: TC
Location: 1343310 - 1344104 (-)
Gene ID: A111_contig_35_1212
Type: TC
Location: 1344178 - 1344636 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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