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Cluster: A111.bin_3_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A111_contig_35 A111_contig_35_1261 1402499 1404481 - 3.A.10.1.5
TC A111_contig_35 A111_contig_35_1262 1404795 1406549 - 1.A.11.2.7
pfam A111_contig_35 A111_contig_35_1263 1406994 1407440 + YqeY
CAZyme A111_contig_35 A111_contig_35_1264 1407468 1408595 + GT28
pfam A111_contig_35 A111_contig_35_1265 1408592 1409200 + G3P_acyltransf
TC A111_contig_35 A111_contig_35_1266 1409268 1409900 - 2.A.115.2.14
TC A111_contig_35 A111_contig_35_1267 1410011 1412038 - 3.A.1.134.4
TC A111_contig_35 A111_contig_35_1268 1412035 1412799 - 3.A.1.134.4
Gene ID: A111_contig_35_1261
Type: TC
Location: 1402499 - 1404481 (-)
Gene ID: A111_contig_35_1262
Type: TC
Location: 1404795 - 1406549 (-)
Gene ID: A111_contig_35_1263
Type: pfam
Location: 1406994 - 1407440 (+)
Gene ID: A111_contig_35_1264
Type: CAZyme
Location: 1407468 - 1408595 (+)
Gene ID: A111_contig_35_1265
Type: pfam
Location: 1408592 - 1409200 (+)
Gene ID: A111_contig_35_1266
Type: TC
Location: 1409268 - 1409900 (-)
Gene ID: A111_contig_35_1267
Type: TC
Location: 1410011 - 1412038 (-)
Gene ID: A111_contig_35_1268
Type: TC
Location: 1412035 - 1412799 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A111_contig_35_1263 vegetarian > omnivore 1.50269 0.01743
A111_contig_35_1263 vegetarian > vegan 2.24415 0.02445

🧭 Explore Read Mapping of CGC

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