dbCAN HGM

Genome Details

Selected Rep_genome_ID: A103.bin_3
Total Genomes Found: 8

Read Mapping - JBrowse

Taxonomic Lineage

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Species

Genomes Table

Genome ID	Genome Length	Completeness	Contamination	Country	Continent	Source
A103.bin_3	3,467,326	99.62%	0%	China(Inner Mongolia)	Asia	IMGG
AG207_44	3,396,774	99.62%	0%	NA	Africa	H3AfricaPhase2
CGMR050471	3,134,313	99.62%	0%	China	Asia	CGMR
GCA_021634125.1_ASM2163412v1_genomic	2,814,985	93.58%	0%	NA	Africa	H3AfricaPhase1
GCA_021639375.1_ASM2163937v1_genomic	2,882,047	95.37%	1.51%	NA	Africa	H3AfricaPhase1
Rep_436	3,319,143	99.6226%	0%	NA	NA	WIS
SPMP06_bin.6	3,222,446	96.41%	0%	Singapore	Asia	SPMP
SPMP28_bin.40	3,341,571	92.06%	0.38%	Singapore	Asia	SPMP

Analysis Charts

CGCs

Gene Cluster ID	Family Name	In Labeled Family	Gene Count	CAZyme Count	Substrate
A103.bin_3_CGC47	CGCFAM_00001	Yes	4	2	pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
A103.bin_3_CGC19	CGCFAM_00013	Yes	4	1
A103.bin_3_CGC48	CGCFAM_00018	Yes	9	3
A103.bin_3_CGC29	CGCFAM_00028	Yes	6	3
A103.bin_3_CGC52	CGCFAM_00050	Yes	10	4
A103.bin_3_CGC24	CGCFAM_00061	Yes	5	2
A103.bin_3_CGC31	CGCFAM_00110	Yes	8	2	pectin/host glycan
A103.bin_3_CGC7	CGCFAM_00120	Yes	6	3
A103.bin_3_CGC38	CGCFAM_00150	Yes	5	1
A103.bin_3_CGC28	CGCFAM_00266	Yes	6	2
A103.bin_3_CGC44	CGCFAM_00300	Yes	4	2
A103.bin_3_CGC43	CGCFAM_00376	Yes	6	1	host glycan
A103.bin_3_CGC13	CGCFAM_00489	Yes	9	7
A103.bin_3_CGC5	CGCFAM_00579	Yes	7	4
A103.bin_3_CGC10	CGCFAM_00588	Yes	3	1
A103.bin_3_CGC27	CGCFAM_00721	Yes	3	1
A103.bin_3_CGC50	CGCFAM_00822	Yes	4	1	host glycan
A103.bin_3_CGC41	CGCFAM_01075	Yes	14	9	pectin
A103.bin_3_CGC14	CGCFAM_01089	Yes	5	2
A103.bin_3_CGC17	CGCFAM_01255	Yes	4	1
A103.bin_3_CGC1	CGCFAM_01502	Yes	4	2
A103.bin_3_CGC40	CGCFAM_01830	Yes	17	5
A103.bin_3_CGC49	CGCFAM_01831	Yes	6	2
A103.bin_3_CGC35	CGCFAM_02941	Yes	18	7	host glycan
A103.bin_3_CGC18	CGCFAM_02963	Yes	4	1

Top CAZyme Families