Cluster: A103.bin_3_CGC52
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: A103.bin_3
- CGC Family ID: CGCFAM_00050
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A103_contig_1100 | A103_contig_1100_2701 | 3312085 | 3313182 | - | GT4 |
| pfam | A103_contig_1100 | A103_contig_1100_2702 | 3313204 | 3314268 | - | Radical_SAM | SPASM |
| CAZyme | A103_contig_1100 | A103_contig_1100_2703 | 3314344 | 3315552 | - | GT4 |
| pfam | A103_contig_1100 | A103_contig_1100_2704 | 3315567 | 3316541 | - | Acyl_transf_3 |
| CAZyme | A103_contig_1100 | A103_contig_1100_2705 | 3316541 | 3317653 | - | GT4 |
| pfam | A103_contig_1100 | A103_contig_1100_2706 | 3317809 | 3319215 | - | Polysacc_synt |
| NULL(UNKNOWN) | A103_contig_1100 | A103_contig_1100_2707 | 3319212 | 3320453 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A103_contig_1100 | A103_contig_1100_2708 | 3320457 | 3322799 | - | 8.A.3.3.4 |
| TC | A103_contig_1100 | A103_contig_1100_2709 | 3322816 | 3323613 | - | 1.B.18.3.2 |
| CAZyme | A103_contig_1100 | A103_contig_1100_2710 | 3323883 | 3325064 | + | GT2 |
Gene ID: A103_contig_1100_2701
Type: CAZyme
Location: 3312085 - 3313182 (-)
Type: CAZyme
Location: 3312085 - 3313182 (-)
Gene ID: A103_contig_1100_2702
Type: pfam
Location: 3313204 - 3314268 (-)
Type: pfam
Location: 3313204 - 3314268 (-)
Gene ID: A103_contig_1100_2703
Type: CAZyme
Location: 3314344 - 3315552 (-)
Type: CAZyme
Location: 3314344 - 3315552 (-)
Gene ID: A103_contig_1100_2704
Type: pfam
Location: 3315567 - 3316541 (-)
Type: pfam
Location: 3315567 - 3316541 (-)
Gene ID: A103_contig_1100_2705
Type: CAZyme
Location: 3316541 - 3317653 (-)
Type: CAZyme
Location: 3316541 - 3317653 (-)
Gene ID: A103_contig_1100_2706
Type: pfam
Location: 3317809 - 3319215 (-)
Type: pfam
Location: 3317809 - 3319215 (-)
Gene ID: A103_contig_1100_2707
Type:
Location: 3319212 - 3320453 (-)
Type:
Location: 3319212 - 3320453 (-)
Gene ID: A103_contig_1100_2708
Type: TC
Location: 3320457 - 3322799 (-)
Type: TC
Location: 3320457 - 3322799 (-)
Gene ID: A103_contig_1100_2709
Type: TC
Location: 3322816 - 3323613 (-)
Type: TC
Location: 3322816 - 3323613 (-)
Gene ID: A103_contig_1100_2710
Type: CAZyme
Location: 3323883 - 3325064 (+)
Type: CAZyme
Location: 3323883 - 3325064 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Barnesiellaceae
Genus
Barnesiella
Species
Barnesiella intestinihominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.