Cluster: A103.bin_3_CGC35
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 7
- Substrate: host glycan
- Genome ID: A103.bin_3
- CGC Family ID: CGCFAM_02941
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A103_contig_1100 | A103_contig_1100_1593 | 1994491 | 1995336 | - | 2.A.64.3.2 |
| pfam | A103_contig_1100 | A103_contig_1100_1594 | 1995440 | 1995670 | - | TatA_B_E |
| pfam | A103_contig_1100 | A103_contig_1100_1595 | 1995817 | 1996698 | + | Acyl_transf_1 |
| TC | A103_contig_1100 | A103_contig_1100_1596 | 1996971 | 1997687 | + | 9.B.20.1.4 |
| TC | A103_contig_1100 | A103_contig_1100_1597 | 1997690 | 1999930 | + | 2.A.37.1.5 |
| peptidase | A103_contig_1100 | A103_contig_1100_1598 | 1999943 | 2001466 | + | C26.957 |
| CAZyme | A103_contig_1100 | A103_contig_1100_1599 | 2001559 | 2003814 | - | GH92 |
| CAZyme | A103_contig_1100 | A103_contig_1100_1600 | 2003821 | 2004792 | - | GH130_2 |
| pfam | A103_contig_1100 | A103_contig_1100_1601 | 2004862 | 2006190 | - | MFS_1 |
| CAZyme | A103_contig_1100 | A103_contig_1100_1602 | 2006235 | 2008301 | - | GH20 |
| CAZyme | A103_contig_1100 | A103_contig_1100_1603 | 2008320 | 2010668 | - | GH20 |
| CAZyme | A103_contig_1100 | A103_contig_1100_1604 | 2010707 | 2012977 | - | GH92 |
| CAZyme | A103_contig_1100 | A103_contig_1100_1605 | 2013024 | 2016371 | - | GH84 |
| NULL(UNKNOWN) | A103_contig_1100 | A103_contig_1100_1606 | 2016374 | 2016565 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | A103_contig_1100 | A103_contig_1100_1607 | 2016576 | 2018609 | - | Laminin_G_3 |
| CAZyme | A103_contig_1100 | A103_contig_1100_1608 | 2018691 | 2022533 | - | GH85 |
| TC | A103_contig_1100 | A103_contig_1100_1609 | 2022632 | 2024344 | - | 8.A.46.2.1 |
| TC | A103_contig_1100 | A103_contig_1100_1610 | 2024344 | 2027919 | - | 1.B.14.6.2 |
Gene ID: A103_contig_1100_1593
Type: TC
Location: 1994491 - 1995336 (-)
Type: TC
Location: 1994491 - 1995336 (-)
Gene ID: A103_contig_1100_1594
Type: pfam
Location: 1995440 - 1995670 (-)
Type: pfam
Location: 1995440 - 1995670 (-)
Gene ID: A103_contig_1100_1595
Type: pfam
Location: 1995817 - 1996698 (+)
Type: pfam
Location: 1995817 - 1996698 (+)
Gene ID: A103_contig_1100_1596
Type: TC
Location: 1996971 - 1997687 (+)
Type: TC
Location: 1996971 - 1997687 (+)
Gene ID: A103_contig_1100_1597
Type: TC
Location: 1997690 - 1999930 (+)
Type: TC
Location: 1997690 - 1999930 (+)
Gene ID: A103_contig_1100_1598
Type: peptidase
Location: 1999943 - 2001466 (+)
Type: peptidase
Location: 1999943 - 2001466 (+)
Gene ID: A103_contig_1100_1599
Type: CAZyme
Location: 2001559 - 2003814 (-)
Type: CAZyme
Location: 2001559 - 2003814 (-)
Gene ID: A103_contig_1100_1600
Type: CAZyme
Location: 2003821 - 2004792 (-)
Type: CAZyme
Location: 2003821 - 2004792 (-)
Gene ID: A103_contig_1100_1601
Type: pfam
Location: 2004862 - 2006190 (-)
Type: pfam
Location: 2004862 - 2006190 (-)
Gene ID: A103_contig_1100_1602
Type: CAZyme
Location: 2006235 - 2008301 (-)
Type: CAZyme
Location: 2006235 - 2008301 (-)
Gene ID: A103_contig_1100_1603
Type: CAZyme
Location: 2008320 - 2010668 (-)
Type: CAZyme
Location: 2008320 - 2010668 (-)
Gene ID: A103_contig_1100_1604
Type: CAZyme
Location: 2010707 - 2012977 (-)
Type: CAZyme
Location: 2010707 - 2012977 (-)
Gene ID: A103_contig_1100_1605
Type: CAZyme
Location: 2013024 - 2016371 (-)
Type: CAZyme
Location: 2013024 - 2016371 (-)
Gene ID: A103_contig_1100_1606
Type:
Location: 2016374 - 2016565 (-)
Type:
Location: 2016374 - 2016565 (-)
Gene ID: A103_contig_1100_1607
Type: pfam
Location: 2016576 - 2018609 (-)
Type: pfam
Location: 2016576 - 2018609 (-)
Gene ID: A103_contig_1100_1608
Type: CAZyme
Location: 2018691 - 2022533 (-)
Type: CAZyme
Location: 2018691 - 2022533 (-)
Gene ID: A103_contig_1100_1609
Type: TC
Location: 2022632 - 2024344 (-)
Type: TC
Location: 2022632 - 2024344 (-)
Gene ID: A103_contig_1100_1610
Type: TC
Location: 2024344 - 2027919 (-)
Type: TC
Location: 2024344 - 2027919 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Barnesiellaceae
Genus
Barnesiella
Species
Barnesiella intestinihominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.