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Cluster: A103.bin_3_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A103_contig_1100 A103_contig_1100_287 325895 329227 + 1.B.14.6.1
pfam A103_contig_1100 A103_contig_1100_288 329247 331199 + SusD_RagB | SusD-like_3
pfam A103_contig_1100 A103_contig_1100_289 331231 332331 + SusE | SusF_SusE | SusF_SusE
CAZyme A103_contig_1100 A103_contig_1100_290 332421 333623 + GH76
CAZyme A103_contig_1100 A103_contig_1100_291 333642 335801 + GH31_1
CAZyme A103_contig_1100 A103_contig_1100_292 335858 337921 + CBM32 | CBM35 | CBM35
CAZyme A103_contig_1100 A103_contig_1100_293 337932 340664 + GH3
Gene ID: A103_contig_1100_287
Type: TC
Location: 325895 - 329227 (+)
Gene ID: A103_contig_1100_288
Type: pfam
Location: 329247 - 331199 (+)
Gene ID: A103_contig_1100_289
Type: pfam
Location: 331231 - 332331 (+)
Gene ID: A103_contig_1100_290
Type: CAZyme
Location: 332421 - 333623 (+)
Gene ID: A103_contig_1100_291
Type: CAZyme
Location: 333642 - 335801 (+)
Gene ID: A103_contig_1100_292
Type: CAZyme
Location: 335858 - 337921 (+)
Gene ID: A103_contig_1100_293
Type: CAZyme
Location: 337932 - 340664 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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