Cluster: A103.bin_3_CGC48
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate:
- Genome ID: A103.bin_3
- CGC Family ID: CGCFAM_00018
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A103_contig_1100 | A103_contig_1100_2506 | 3109444 | 3110697 | - | GT4 |
| pfam | A103_contig_1100 | A103_contig_1100_2507 | 3110666 | 3111799 | - | Epimerase_2 |
| pfam | A103_contig_1100 | A103_contig_1100_2508 | 3111820 | 3112968 | - | Epimerase | Polysacc_synt_C |
| TC | A103_contig_1100 | A103_contig_1100_2509 | 3112980 | 3114002 | - | 9.B.18.2.1 |
| NULL(UNKNOWN) | A103_contig_1100 | A103_contig_1100_2510 | 3114008 | 3115075 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A103_contig_1100 | A103_contig_1100_2511 | 3115083 | 3116366 | - | GT4 |
| pfam | A103_contig_1100 | A103_contig_1100_2512 | 3116363 | 3117529 | - | Glycos_transf_1 | Glyco_trans_1_4 |
| pfam | A103_contig_1100 | A103_contig_1100_2513 | 3117526 | 3118614 | - | EpsG |
| CAZyme | A103_contig_1100 | A103_contig_1100_2514 | 3118611 | 3119861 | - | GT4 |
Gene ID: A103_contig_1100_2506
Type: CAZyme
Location: 3109444 - 3110697 (-)
Type: CAZyme
Location: 3109444 - 3110697 (-)
Gene ID: A103_contig_1100_2507
Type: pfam
Location: 3110666 - 3111799 (-)
Type: pfam
Location: 3110666 - 3111799 (-)
Gene ID: A103_contig_1100_2508
Type: pfam
Location: 3111820 - 3112968 (-)
Type: pfam
Location: 3111820 - 3112968 (-)
Gene ID: A103_contig_1100_2509
Type: TC
Location: 3112980 - 3114002 (-)
Type: TC
Location: 3112980 - 3114002 (-)
Gene ID: A103_contig_1100_2510
Type:
Location: 3114008 - 3115075 (-)
Type:
Location: 3114008 - 3115075 (-)
Gene ID: A103_contig_1100_2511
Type: CAZyme
Location: 3115083 - 3116366 (-)
Type: CAZyme
Location: 3115083 - 3116366 (-)
Gene ID: A103_contig_1100_2512
Type: pfam
Location: 3116363 - 3117529 (-)
Type: pfam
Location: 3116363 - 3117529 (-)
Gene ID: A103_contig_1100_2513
Type: pfam
Location: 3117526 - 3118614 (-)
Type: pfam
Location: 3117526 - 3118614 (-)
Gene ID: A103_contig_1100_2514
Type: CAZyme
Location: 3118611 - 3119861 (-)
Type: CAZyme
Location: 3118611 - 3119861 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Barnesiellaceae
Genus
Barnesiella
Species
Barnesiella intestinihominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.