Differentially Abundant CAZymes in CGCs
Total: 24804 entries| CAZyme Gene ID ↓ | CGC ID | CAZyme Family | Study | Condition Pair | log2FC | FDR P-value | Continent | CGC Family ID | Substrate |
|---|---|---|---|---|---|---|---|---|---|
| HRGMv2_0429_23_8 | HRGMv2_0429_CGC44 | GH13 | IBD (Lloyd-Price et al., 2019) | UC > CD | 1.07392 | 0.01878 | Africa | CGCFAM_02925 | |
| HRGMv2_0429_2_128 | HRGMv2_0429_CGC8 | GH3 | Diet (De Filippis et al., 2019) | vegetarian > vegan | 1.11253 | 0.00567 | Africa | CGCFAM_09541 | |
| HRGMv2_0429_16_33 | HRGMv2_0429_CGC39 | GH16 | IBD (Lloyd-Price et al., 2019) | UC > CD | 1.63161 | 0.01878 | Africa | CGCFAM_00001 | Pectin Galactan Beta-glucan Xylan Beta-mannan Host glycan |
| HRGMv2_0429_14_76 | HRGMv2_0429_CGC38 | GH43 | Diet (De Filippis et al., 2019) | vegetarian > vegan | 1.01721 | 0.00567 | Africa | NA | |
| HRGMv2_0429_14_67 | HRGMv2_0429_CGC37 | GH13 | IBD (Lloyd-Price et al., 2019) | UC > CD | 1.07759 | 0.01878 | Africa | NA | |
| HRGMv2_0429_13_35 | HRGMv2_0429_CGC34 | GH3 | Diet (De Filippis et al., 2019) | vegetarian > vegan | 2.42859 | 0.00567 | Africa | CGCFAM_08227 | |
| HRGMv2_0429_1_326 | HRGMv2_0429_CGC4 | GH5 | IBD (Lloyd-Price et al., 2019) | UC > CD | 1.15332 | 0.01878 | Africa | NA | |
| HRGMv2_0429_1_260 | HRGMv2_0429_CGC3 | CE7 | IBD (Lloyd-Price et al., 2019) | UC > CD | 1.47203 | 0.01878 | Africa | CGCFAM_00241 | |
| HRGMv2_0426_7_76 | HRGMv2_0426_CGC20 | GT4 | Diet (Huang et al., 2024) | omnivore > flexitarian | 1.09849 | 0.00085 | Europe | CGCFAM_00028 | |
| HRGMv2_0426_22_5 | HRGMv2_0426_CGC32 | GT35 | Diet (Huang et al., 2024) | omnivore > flexitarian | 2.06335 | 0.00085 | Europe | CGCFAM_04850 |