y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g048705m |
Family | GH9 |
Protein Properties | Length: 488 Molecular Weight: 54146.2 Isoelectric Point: 8.2436 |
Chromosome | Chromosome/Scaffold: 00031 Start: 621657 End: 623746 |
Description | glycosyl hydrolase 9B1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 6 | 478 | 0 |
DYGDALSKCVLFFEGQRSGKLPSTQRMTWRKDSALRDGADVGVDLVGGYYDAGDNIKFSFPMAFTTTMLAWSILEFGSHMGPEQKNAQEALKWGTDYFLK ATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIVFKSANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCP YYCDFDGYMNFMDSAFQDELIWAAAWLFKATNRQSYMKYVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDAKHAGINVLISRLVMNTSKSDPFVRHADK FICSVLPESPTKLVTYSSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLECGNIAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGRKFPRRIH HRGSSLPSIDTHPKHVKCLEGSIFFKSKYPNFNLLTGAIVGGPDINDQYNDTRINWSQSEPTTYINAPFVGVL |
Full Sequence |
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Protein Sequence Length: 488 Download |
GVASRDYGDA LSKCVLFFEG QRSGKLPSTQ RMTWRKDSAL RDGADVGVDL VGGYYDAGDN 60 IKFSFPMAFT TTMLAWSILE FGSHMGPEQK NAQEALKWGT DYFLKATSVP GKVIAQVGEP 120 NADHNCWERP EDMDTPRTSY VVNTTNPGSE VSAEIAAALA ASSIVFKSAN SQYSKILLQR 180 ASQVFQFADQ YQGSYNTSVG SGVCPYYCDF DGYMNFMDSA FQDELIWAAA WLFKATNRQS 240 YMKYVVDNIH YLENSTMRQS KEALFVGGSF AEFGWDAKHA GINVLISRLV MNTSKSDPFV 300 RHADKFICSV LPESPTKLVT YSSGGLLFKP GGSNSQHVTA MSFLLLVYSR YLTRFHRSLE 360 CGNIAVTPSR LIQVAKTQAD YLLGSNPLSM SYMVGYGRKF PRRIHHRGSS LPSIDTHPKH 420 VKCLEGSIFF KSKYPNFNLL TGAIVGGPDI NDQYNDTRIN WSQSEPTTYI NAPFVGVLSY 480 FKAYPHP* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02613 | PLN02613 | 9.0e-151 | 1 | 476 | 481 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 3.0e-162 | 6 | 479 | 480 | + Glycosyl hydrolase family 9. | ||
PLN02308 | PLN02308 | 0 | 3 | 487 | 487 | + endoglucanase | ||
PLN02266 | PLN02266 | 0 | 1 | 481 | 483 | + endoglucanase | ||
PLN03009 | PLN03009 | 0 | 3 | 487 | 490 | + cellulase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002264822.1 | 0 | 2 | 485 | 14 | 494 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002321833.1 | 0 | 2 | 487 | 7 | 486 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321834.1 | 0 | 4 | 483 | 26 | 488 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510937.1 | 0 | 2 | 485 | 24 | 500 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
RefSeq | XP_002510938.1 | 0 | 2 | 487 | 24 | 503 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 6 | 479 | 4 | 426 | A Chain A, Structure Of Glyoxylate Reductase 1 From Arabidopsis (Atglyr1) |
PDB | 1ksc_A | 0 | 6 | 479 | 4 | 426 | A Chain A, Structure Of Glyoxylate Reductase 1 From Arabidopsis (Atglyr1) |
PDB | 1ks8_A | 0 | 6 | 479 | 4 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 6 | 479 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 6 | 479 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO788388 | 420 | 70 | 484 | 0 |
DT762304 | 290 | 198 | 485 | 0 |
DT762654 | 267 | 221 | 485 | 0 |
FE521031 | 307 | 119 | 423 | 0 |
DY296968 | 359 | 100 | 455 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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