y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.019G069300.2 |
Family | GH9 |
Protein Properties | Length: 482 Molecular Weight: 53410.5 Isoelectric Point: 8.1735 |
Chromosome | Chromosome/Scaffold: 19 Start: 10264811 End: 10267575 |
Description | cellulase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 26 | 474 | 0 |
NYKDALAKSILFFQGQRSGRLPRSQQLAWRSDSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKRMGPELPNARAAIRWATDYLLK CATATPGKLYVGVGDPNVDHKCWERPEDMDTVRTVFSVSARSPGSDVAGETAAALAAASMVFRKVDRKYSALLLRTARKVFQFAMQYQGAYSDSLGSAVC PFYCSYSGYKDELLWGAAWLFRATNEMSYYNIFKSLGADDQPDLFSWDNKYAGVHVLLSRRALLNNDKNFEQFEGEAESFMCRILPNSPYKTTQYTQGGL MYKLPESNLQYVTSITFLLTTYAKYMKATRHTFNCGNLLVTPNSLLYVDYILGENPIRMSYMVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFF HSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLA |
Full Sequence |
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Protein Sequence Length: 482 Download |
MRRGASFCLL FSLSLALLGL VHANPNYKDA LAKSILFFQG QRSGRLPRSQ QLAWRSDSGL 60 SDGLFAHVDL TGGYYDAGDN VKFNFPMAFT TTMLSWSTLE YGKRMGPELP NARAAIRWAT 120 DYLLKCATAT PGKLYVGVGD PNVDHKCWER PEDMDTVRTV FSVSARSPGS DVAGETAAAL 180 AAASMVFRKV DRKYSALLLR TARKVFQFAM QYQGAYSDSL GSAVCPFYCS YSGYKDELLW 240 GAAWLFRATN EMSYYNIFKS LGADDQPDLF SWDNKYAGVH VLLSRRALLN NDKNFEQFEG 300 EAESFMCRIL PNSPYKTTQY TQGGLMYKLP ESNLQYVTSI TFLLTTYAKY MKATRHTFNC 360 GNLLVTPNSL LYVDYILGEN PIRMSYMVGF GPNFPKRIHH RGSSLPSLAS HPQAIGCDSG 420 FEPFFHSANP NPNILTGAIV GGPNQNDGYP DERSDYSHSE PATYINAAMV GPLAYFAATL 480 N* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02175 | PLN02175 | 0 | 22 | 478 | 462 | + endoglucanase | ||
PLN02266 | PLN02266 | 0 | 23 | 477 | 464 | + endoglucanase | ||
PLN02308 | PLN02308 | 0 | 21 | 481 | 470 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 26 | 474 | 465 | + Glycosyl hydrolase family 9. | ||
PLN03009 | PLN03009 | 0 | 23 | 481 | 471 | + cellulase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAA96135.1 | 0 | 1 | 478 | 2 | 484 | endo-1,4-beta-glucanase [Pisum sativum] |
GenBank | AAB65156.1 | 0 | 1 | 478 | 1 | 484 | basic cellulase [Citrus sinensis] |
GenBank | AAT75042.1 | 0 | 1 | 481 | 1 | 486 | Cel9B [Populus tremula x Populus tremuloides] |
RefSeq | XP_002269875.1 | 0 | 23 | 479 | 28 | 489 | PREDICTED: similar to Cel9B [Vitis vinifera] |
RefSeq | XP_002329161.1 | 0 | 1 | 481 | 1 | 481 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 26 | 478 | 4 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1ksc_A | 0 | 26 | 478 | 4 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1ks8_A | 0 | 26 | 478 | 4 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 26 | 474 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 26 | 474 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |