y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.008G250400.1 |
Family | GH9 |
Protein Properties | Length: 519 Molecular Weight: 57286.4 Isoelectric Point: 7.2206 |
Chromosome | Chromosome/Scaffold: 08 Start: 53425747 End: 53427991 |
Description | glycosyl hydrolase 9B15 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 42 | 492 | 0 |
DYKDALGKAIMFFEGQRSGKLPANQRLKWRGDSALTDGKPDNVNLVGGYYDAGDNVKFGWPMAFTVTLLSWAAVEYRHEISSAHQLSHLRAAIRWGTDFI LRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYKITSDSPGTEASAEASAALSAASLVFKRVDSNYSKKLLSKSKSLFKLADKYRGSYKDSCPFYC SFSGYQDELLWSAAWLYKASRDEKYLNYVLSNQGWSQAVSEFSWDTKFAGAQALLAKEFYGGKKDLSKYKTDVESFICALMPGSSSLQIQTTAGGLLYIR DSSNLQYVTSSCTVLSVYSKTLMTSNIDGIHCGSAHFSASQIKSFVKSQVNYILGNNPMKMSYMVGFGSKYPMQLHHRGSSIPSIHSHPSRVGCNDGYSS YYSSNNPNPNQHVGAIVGGPDSSDHFNDQRSDYSHSEPTTYINAAFVGAVA |
Full Sequence |
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Protein Sequence Length: 519 Download |
MKKMGCVEIV WGLVLCCNLA MALTSSSHNE LAFEDVEHLS YDYKDALGKA IMFFEGQRSG 60 KLPANQRLKW RGDSALTDGK PDNVNLVGGY YDAGDNVKFG WPMAFTVTLL SWAAVEYRHE 120 ISSAHQLSHL RAAIRWGTDF ILRAHTSPTT LYTQVGDGNA DHQCWERPED MDTPRTLYKI 180 TSDSPGTEAS AEASAALSAA SLVFKRVDSN YSKKLLSKSK SLFKLADKYR GSYKDSCPFY 240 CSFSGYQDEL LWSAAWLYKA SRDEKYLNYV LSNQGWSQAV SEFSWDTKFA GAQALLAKEF 300 YGGKKDLSKY KTDVESFICA LMPGSSSLQI QTTAGGLLYI RDSSNLQYVT SSCTVLSVYS 360 KTLMTSNIDG IHCGSAHFSA SQIKSFVKSQ VNYILGNNPM KMSYMVGFGS KYPMQLHHRG 420 SSIPSIHSHP SRVGCNDGYS SYYSSNNPNP NQHVGAIVGG PDSSDHFNDQ RSDYSHSEPT 480 TYINAAFVGA VAALLDGTKQ EPLQLLLINT TINMVDYM* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02308 | PLN02308 | 4.0e-161 | 41 | 492 | 461 | + endoglucanase | ||
PLN02909 | PLN02909 | 3.0e-170 | 40 | 494 | 455 | + Endoglucanase | ||
PLN02266 | PLN02266 | 1.0e-177 | 13 | 494 | 498 | + endoglucanase | ||
PLN02613 | PLN02613 | 0 | 31 | 515 | 486 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 42 | 492 | 464 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC78504.1 | 0 | 28 | 498 | 19 | 496 | cellulase [Phaseolus vulgaris] |
EMBL | CAA52343.1 | 0 | 40 | 516 | 31 | 507 | cellulase [Sambucus nigra] |
EMBL | CBI34394.1 | 0 | 4 | 501 | 1 | 494 | unnamed protein product [Vitis vinifera] |
Swiss-Prot | P22503 | 0 | 28 | 498 | 19 | 496 | GUN_PHAVU RecName: Full=Endoglucanase; AltName: Full=Endo-1,4-beta-glucanase; AltName: Full=Abscission cellulase; Flags: Precursor |
RefSeq | XP_002272935.1 | 0 | 9 | 498 | 1 | 486 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 39 | 495 | 1 | 429 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1ksc_A | 0 | 39 | 495 | 1 | 429 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1ks8_A | 0 | 39 | 495 | 1 | 429 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 40 | 503 | 3 | 449 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 40 | 503 | 3 | 449 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |