y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra005536 |
Family | GH9 |
Protein Properties | Length: 523 Molecular Weight: 59137.2 Isoelectric Point: 6.1196 |
Chromosome | Chromosome/Scaffold: 05 Start: 6063918 End: 6066983 |
Description | glycosyl hydrolase 9B8 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 36 | 499 | 0 |
DYGEALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYHDAGDHVKFGLPMAFTVTMLSWSVIEYGDSLASTGELSHALEAIKWGTDYF IKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRRAFKIDENNPGSDLAGETAAAMAAASIVFRTTNPHYSHLLLHHAQQLFEFGDKYRGKYDESLRVVK SYYASVSGYMDELLWGATWLYRATDNDHYMSYVVDMAHQLGGLSWAMSEFSWDVKFAGVQLLASMLIKEDKHKQHSEVLQQYKSKADHYLCSILNKNING TNVQRTPGGLLYVRQWNNMQYVSTASFLLTVYSDHLRKSNSDLECHEGTVTPDEMLVFAKSQIDYTLGSNPMKTSYLVGYGPKYPTRVHHRGASIASYKD YKGFIGCTQGYDYWYGRSEPNPSVLVGALVGGPDDRDNFFDRRDNYVQTEACTYNTAPLVGVFA |
Full Sequence |
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Protein Sequence Length: 523 Download |
MEIHRHRRWH FLLLITISSA ISLIGVSSET EVGGFDYGEA LSKSLLYFEA QRSGRLPYNQ 60 RVTWRDHSGL TDGLEQGVDL VGGYHDAGDH VKFGLPMAFT VTMLSWSVIE YGDSLASTGE 120 LSHALEAIKW GTDYFIKAHT SPNVLWAEVG DGDTDHYCWQ RPEDMTTSRR AFKIDENNPG 180 SDLAGETAAA MAAASIVFRT TNPHYSHLLL HHAQQLFEFG DKYRGKYDES LRVVKSYYAS 240 VSGYMDELLW GATWLYRATD NDHYMSYVVD MAHQLGGLSW AMSEFSWDVK FAGVQLLASM 300 LIKEDKHKQH SEVLQQYKSK ADHYLCSILN KNINGTNVQR TPGGLLYVRQ WNNMQYVSTA 360 SFLLTVYSDH LRKSNSDLEC HEGTVTPDEM LVFAKSQIDY TLGSNPMKTS YLVGYGPKYP 420 TRVHHRGASI ASYKDYKGFI GCTQGYDYWY GRSEPNPSVL VGALVGGPDD RDNFFDRRDN 480 YVQTEACTYN TAPLVGVFAR LIEIEEQKLE EEDVRLVATY RK* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02420 | PLN02420 | 0 | 25 | 520 | 496 | + endoglucanase | ||
PLN02171 | PLN02171 | 0 | 33 | 500 | 468 | + endoglucanase | ||
PLN02340 | PLN02340 | 0 | 25 | 500 | 476 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 36 | 499 | 466 | + Glycosyl hydrolase family 9. | ||
PLN00119 | PLN00119 | 0 | 36 | 500 | 465 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN81074.1 | 0 | 10 | 509 | 9 | 537 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_180858.1 | 0 | 4 | 522 | 6 | 525 | AtGH9B8 (Arabidopsis thaliana glycosyl hydrolase 9B8); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
RefSeq | XP_002321149.1 | 0 | 20 | 520 | 25 | 526 | glycosyl hydrolase family 9 [Populus trichocarpa] |
RefSeq | XP_002525326.1 | 0 | 35 | 520 | 44 | 527 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
RefSeq | XP_002529469.1 | 0 | 35 | 513 | 27 | 499 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 35 | 504 | 3 | 431 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1ksc_A | 0 | 35 | 504 | 3 | 431 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1ks8_A | 0 | 35 | 504 | 3 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 35 | 503 | 4 | 442 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 35 | 503 | 4 | 442 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |