y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb07g020700.1 |
Family | GH9 |
Protein Properties | Length: 507 Molecular Weight: 56292.3 Isoelectric Point: 7.9084 |
Chromosome | Chromosome/Scaffold: 7 Start: 53568974 End: 53570779 |
Description | glycosyl hydrolase 9B8 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 27 | 494 | 0 |
NYKRALHSSLLYFEAQRSGHLPYNQRVKWRGHSGLADGLQQGVDLVGGYYDAGDNVKFGLPMAFTVTMLSWSAMEFRDEIKAAGEWRHVLEAIKWGTDYF IKAHAEPDVLWAEVGDGDTDHYCWQRPEDMTTSRQAYKVDRDNPGSDLVGETAAAMAAASIVFRRSSPHYSRLLLHHAEQLFEFGDKYRGKYDSSVSEVR RYYASVSGYGDEMLWAALWLHRATMRTEYLDYAVAMADEFGGTTWAINEFSWDVKYAGLQILAAKLLLEGSHRPEHRTTLEQYKSKAEHYLCACLGKNGA AGNVNRTAGGMLYVRQWNNMQYVTNAAFLLTVYSRYLAAATTGASMVQCPDGPVRAGELLELARAQADYVLGGNPAGVSYLVGNGQRFPRRVHHRGASIV SHRADGRFIGCVQGYDHWFRRAGSNPNVVVGAIVGGPDHRDRFSDRRSNYMQTEACTYNTAPMVGVFA |
Full Sequence |
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Protein Sequence Length: 507 Download |
MIASFCAVLT LVLLPFAAAT GGHGNFNYKR ALHSSLLYFE AQRSGHLPYN QRVKWRGHSG 60 LADGLQQGVD LVGGYYDAGD NVKFGLPMAF TVTMLSWSAM EFRDEIKAAG EWRHVLEAIK 120 WGTDYFIKAH AEPDVLWAEV GDGDTDHYCW QRPEDMTTSR QAYKVDRDNP GSDLVGETAA 180 AMAAASIVFR RSSPHYSRLL LHHAEQLFEF GDKYRGKYDS SVSEVRRYYA SVSGYGDEML 240 WAALWLHRAT MRTEYLDYAV AMADEFGGTT WAINEFSWDV KYAGLQILAA KLLLEGSHRP 300 EHRTTLEQYK SKAEHYLCAC LGKNGAAGNV NRTAGGMLYV RQWNNMQYVT NAAFLLTVYS 360 RYLAAATTGA SMVQCPDGPV RAGELLELAR AQADYVLGGN PAGVSYLVGN GQRFPRRVHH 420 RGASIVSHRA DGRFIGCVQG YDHWFRRAGS NPNVVVGAIV GGPDHRDRFS DRRSNYMQTE 480 ACTYNTAPMV GVFAHLHSQA GRSETK* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02420 | PLN02420 | 0 | 6 | 496 | 498 | + endoglucanase | ||
PLN02171 | PLN02171 | 0 | 9 | 502 | 494 | + endoglucanase | ||
PLN02340 | PLN02340 | 0 | 3 | 505 | 503 | + endoglucanase | ||
PLN00119 | PLN00119 | 0 | 4 | 496 | 493 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 27 | 494 | 470 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ07048.1 | 0 | 26 | 499 | 35 | 509 | hypothetical protein OsI_29295 [Oryza sativa Indica Group] |
GenBank | EEE68717.1 | 0 | 26 | 499 | 35 | 491 | hypothetical protein OsJ_27375 [Oryza sativa Japonica Group] |
Swiss-Prot | Q84Q51 | 0 | 26 | 499 | 35 | 509 | GUN21_ORYSJ RecName: Full=Endoglucanase 21; AltName: Full=Endo-1,4-beta glucanase 21; AltName: Full=OsGLU9; Flags: Precursor |
RefSeq | XP_002445507.1 | 0 | 1 | 506 | 1 | 506 | hypothetical protein SORBIDRAFT_07g020700 [Sorghum bicolor] |
RefSeq | XP_002462339.1 | 0 | 27 | 500 | 46 | 525 | hypothetical protein SORBIDRAFT_02g024050 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 26 | 496 | 3 | 428 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 1ksc_A | 0 | 26 | 496 | 3 | 428 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 1ks8_A | 0 | 26 | 496 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2xfg_A | 0 | 24 | 502 | 22 | 465 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 4tf4_B | 0 | 26 | 501 | 4 | 445 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |