y
Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr5g085730.1 |
Family | GH9 |
Protein Properties | Length: 518 Molecular Weight: 58843.4 Isoelectric Point: 6.6244 |
Chromosome | Chromosome/Scaffold: 5 Start: 36028973 End: 36032829 |
Description | glycosyl hydrolase 9B8 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 31 | 494 | 0 |
DYGDALSKSLLYFEAQRSGRLPYNQRVAWRDHSALIDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWGAIEYLQEIEGAGELQHTMEAIKWGTDYF IKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRRAFKIDENNPGSDLAGETAAAMTAASIVFKKTNPHYSHLLLHHAQQLFEFGDKYRGKYDVSVGVVK SYYASVSGYMDELLWAATWLYKATDKEEYLDYVIKNANLFGGTGWSITEFSWDVKYAGLQLIASQFLNQAKHKKHSDILEQYRSKAEYYICSCLNKNING TNVERTPAGLLYVRQWNNMQHVSTASFLLTIYSDYLKNTNQKLTCHGGILDHKEILSFAKSQVDYILGSNPMNMSYLVGYGPSYPKRVHHRGASIMSYKE NKGFIGCTQGYDNWYSKEDPNPNVLVGALVGGPDWQDNFEDKRNNFMQTEACTYNTAPLVALFA |
Full Sequence |
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Protein Sequence Length: 518 Download |
MEKKKHHFLM QHCCLFLFIF TIFTTNSQAF DYGDALSKSL LYFEAQRSGR LPYNQRVAWR 60 DHSALIDGLE QGVDLVGGYY DAGDHVKFGL PMAFTVTMLS WGAIEYLQEI EGAGELQHTM 120 EAIKWGTDYF IKAHTSPNVL WAEVGDGDTD HYCWQRPEDM TTSRRAFKID ENNPGSDLAG 180 ETAAAMTAAS IVFKKTNPHY SHLLLHHAQQ LFEFGDKYRG KYDVSVGVVK SYYASVSGYM 240 DELLWAATWL YKATDKEEYL DYVIKNANLF GGTGWSITEF SWDVKYAGLQ LIASQFLNQA 300 KHKKHSDILE QYRSKAEYYI CSCLNKNING TNVERTPAGL LYVRQWNNMQ HVSTASFLLT 360 IYSDYLKNTN QKLTCHGGIL DHKEILSFAK SQVDYILGSN PMNMSYLVGY GPSYPKRVHH 420 RGASIMSYKE NKGFIGCTQG YDNWYSKEDP NPNVLVGALV GGPDWQDNFE DKRNNFMQTE 480 ACTYNTAPLV ALFAKFLHIE DNKMVHDCNS LLVASFK* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02420 | PLN02420 | 0 | 29 | 516 | 488 | + endoglucanase | ||
PLN02171 | PLN02171 | 0 | 31 | 495 | 465 | + endoglucanase | ||
PLN02340 | PLN02340 | 0 | 27 | 495 | 469 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 31 | 494 | 466 | + Glycosyl hydrolase family 9. | ||
PLN00119 | PLN00119 | 0 | 31 | 495 | 465 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN81074.1 | 0 | 5 | 516 | 2 | 547 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_180858.1 | 0 | 4 | 495 | 9 | 503 | AtGH9B8 (Arabidopsis thaliana glycosyl hydrolase 9B8); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
RefSeq | XP_002321149.1 | 0 | 1 | 516 | 1 | 526 | glycosyl hydrolase family 9 [Populus trichocarpa] |
RefSeq | XP_002525326.1 | 0 | 2 | 516 | 15 | 527 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
RefSeq | XP_002529469.1 | 0 | 27 | 516 | 24 | 510 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 29 | 492 | 2 | 431 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 1ksc_A | 0 | 29 | 492 | 2 | 431 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 1ks8_A | 0 | 29 | 492 | 2 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 29 | 483 | 3 | 427 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 29 | 483 | 3 | 427 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |