y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10019329m |
Family | GH9 |
Protein Properties | Length: 488 Molecular Weight: 54517 Isoelectric Point: 9.0323 |
Chromosome | Chromosome/Scaffold: 5 Start: 5745912 End: 5748139 |
Description | glycosyl hydrolase 9A4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 34 | 481 | 0 |
NYKEALTKSLIFLEAQRSGKLPPNNRVKWRGDSALDDGKLANVDLSGGYYDAGDNVKYGLPMAFTITTLAWSTIAYEKELRATGELENARAAIRWGTDYF IKCSCRKNRLYVQVGDPNADHQCWARPENMQTPRTVLEISDKNPGTEIAAETAAAFAASSIVFRHVDHKYSRRLLNKAKLLFKLAKSHKGTYDGECPFYC SNSGYNDELIWAATWLYKATRKEMYLSYLKFEAISAYVAEFSWDLKYAGAQILIVRWIFEGTKGLDLYKQQADSFICSNLPDSPYHQVFTTPGGMIHLRD GANSQYVTSTAFLFSAYADILKHHNQKITCGSKQFDSTHLMAFAKKQMDYLLGHNPRGRSYMVGFGPNPPKQAHHRGASVPMHEANAPLSCPMSFVQWYN KNQPNANELTGAILGGPDRQDNFQDLRWTSVYTEPCTYINSIAVGVLA |
Full Sequence |
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Protein Sequence Length: 488 Download |
MGNERRGNVA TTRAILLCLY GIISIVSVNG TFINYKEALT KSLIFLEAQR SGKLPPNNRV 60 KWRGDSALDD GKLANVDLSG GYYDAGDNVK YGLPMAFTIT TLAWSTIAYE KELRATGELE 120 NARAAIRWGT DYFIKCSCRK NRLYVQVGDP NADHQCWARP ENMQTPRTVL EISDKNPGTE 180 IAAETAAAFA ASSIVFRHVD HKYSRRLLNK AKLLFKLAKS HKGTYDGECP FYCSNSGYND 240 ELIWAATWLY KATRKEMYLS YLKFEAISAY VAEFSWDLKY AGAQILIVRW IFEGTKGLDL 300 YKQQADSFIC SNLPDSPYHQ VFTTPGGMIH LRDGANSQYV TSTAFLFSAY ADILKHHNQK 360 ITCGSKQFDS THLMAFAKKQ MDYLLGHNPR GRSYMVGFGP NPPKQAHHRG ASVPMHEANA 420 PLSCPMSFVQ WYNKNQPNAN ELTGAILGGP DRQDNFQDLR WTSVYTEPCT YINSIAVGVL 480 AKLAAKA* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02171 | PLN02171 | 1.0e-147 | 34 | 474 | 456 | + endoglucanase | ||
PLN02266 | PLN02266 | 4.0e-151 | 34 | 474 | 452 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 9.0e-154 | 34 | 474 | 456 | + Glycosyl hydrolase family 9. | ||
PLN02613 | PLN02613 | 3.0e-170 | 15 | 474 | 463 | + endoglucanase | ||
PLN02909 | PLN02909 | 0 | 13 | 475 | 463 | + Endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB83158.1 | 0 | 6 | 485 | 7 | 482 | cellulase-like protein [Arabidopsis thaliana] |
EMBL | CAN82881.1 | 0 | 28 | 484 | 8 | 464 | hypothetical protein [Vitis vinifera] |
EMBL | CBI20730.1 | 0 | 1 | 477 | 1 | 475 | unnamed protein product [Vitis vinifera] |
EMBL | CBI20730.1 | 0 | 17 | 485 | 500 | 968 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189972.2 | 0 | 6 | 485 | 7 | 485 | AtGH9A4 (Arabidopsis thaliana Glycosyl Hydrolase 9A4); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 34 | 485 | 4 | 430 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 1ksc_A | 0 | 34 | 485 | 4 | 430 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 1ks8_A | 0 | 34 | 485 | 4 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 33 | 486 | 4 | 443 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 33 | 486 | 4 | 443 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |