y
Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr5g009970.1 |
Family | GH9 |
Protein Properties | Length: 503 Molecular Weight: 55557.4 Isoelectric Point: 7.8008 |
Chromosome | Chromosome/Scaffold: 5 Start: 2324879 End: 2327935 |
Description | glycosyl hydrolase 9B15 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 41 | 491 | 0 |
NYADALGKAILFFEGQRSGKLPKDQRVKWRGDSALSDGKTQNVNLVGGYYDAGDNVKFGWPMSFTVSLLSWAAVEYESEISSVNQIGYLRRAIRWGTNFI LQSHTSPITLFTQVGEGNADHNCWERPEDMDTPRTLYKIDANSPGTEAAAEAAAALSAASIVFKKKDTKYSSKLLRHSKSLFDFADKYRGTYTGSCPFYC SYSGYQDELLWAAAWLYKASGESKYLKYITDNQGWNQAASEFSWDNKFVGVQTLLTQEFYGGKKDLAKIHSDGESFICALMQGSYSLQIKKTPGGLLYTR DSNNLQYTTTSTMVLFIFSKILNKNNIDGIHCGSTNFTSSEIKAFAKSQVDYILGNNPMKMSYMVGYGSKYPKQLHHRGSSIPSIKVHQTKVGCNDGYTD YFYSSNPNPNIHVGAIVGGPDFNDQFNDARSDYSHSEPTTYMNAAFIGSVA |
Full Sequence |
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Protein Sequence Length: 503 Download |
MGCSLLISGL ILWFAMSSKN NGILAIMDEE LISKSSSSSY NYADALGKAI LFFEGQRSGK 60 LPKDQRVKWR GDSALSDGKT QNVNLVGGYY DAGDNVKFGW PMSFTVSLLS WAAVEYESEI 120 SSVNQIGYLR RAIRWGTNFI LQSHTSPITL FTQVGEGNAD HNCWERPEDM DTPRTLYKID 180 ANSPGTEAAA EAAAALSAAS IVFKKKDTKY SSKLLRHSKS LFDFADKYRG TYTGSCPFYC 240 SYSGYQDELL WAAAWLYKAS GESKYLKYIT DNQGWNQAAS EFSWDNKFVG VQTLLTQEFY 300 GGKKDLAKIH SDGESFICAL MQGSYSLQIK KTPGGLLYTR DSNNLQYTTT STMVLFIFSK 360 ILNKNNIDGI HCGSTNFTSS EIKAFAKSQV DYILGNNPMK MSYMVGYGSK YPKQLHHRGS 420 SIPSIKVHQT KVGCNDGYTD YFYSSNPNPN IHVGAIVGGP DFNDQFNDAR SDYSHSEPTT 480 YMNAAFIGSV AALIGEIKTG TM* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00119 | PLN00119 | 4.0e-179 | 41 | 493 | 461 | + endoglucanase | ||
PLN02613 | PLN02613 | 0 | 41 | 496 | 456 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 41 | 491 | 464 | + Glycosyl hydrolase family 9. | ||
PLN02266 | PLN02266 | 0 | 40 | 493 | 463 | + endoglucanase | ||
PLN02340 | PLN02340 | 0 | 40 | 493 | 469 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PRF/SEQDB | 0 | 1 | 496 | 1 | 494 | UP10_LACSN Unknown protein 10 from 2D-PAGE | |
GenBank | AAC78504.1 | 0 | 1 | 496 | 1 | 495 | cellulase [Phaseolus vulgaris] |
EMBL | CAA52343.1 | 0 | 36 | 496 | 28 | 488 | cellulase [Sambucus nigra] |
Swiss-Prot | P22503 | 0 | 1 | 496 | 1 | 495 | GUN_PHAVU RecName: Full=Endoglucanase; AltName: Full=Endo-1,4-beta-glucanase; AltName: Full=Abscission cellulase; Flags: Precursor |
RefSeq | XP_002298010.1 | 0 | 29 | 502 | 4 | 473 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 39 | 494 | 2 | 429 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1ksc_A | 0 | 39 | 494 | 2 | 429 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1ks8_A | 0 | 39 | 494 | 2 | 429 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 39 | 496 | 3 | 443 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 39 | 496 | 3 | 443 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |