y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.010G092700.1 |
Family | GH9 |
Protein Properties | Length: 486 Molecular Weight: 54374.8 Isoelectric Point: 8.4293 |
Chromosome | Chromosome/Scaffold: 10 Start: 14945177 End: 14947301 |
Description | glycosyl hydrolase 9A4 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 29 | 476 | 0 |
NYKEALTKSLIFLEAQRSGKLPPNHRVAWRGDSCLNDGKEANMDLVGGYYDAGDNVKYGLPMAFTVTTLAWSAIVYNSELKSAGELGNTQAAIRWGTDYF LKAACKRNKLYVQVGDPEKEHQCWVRPENMKHPRPVLEINEKTPGTEIAAETSAALAASSIVFRRIDRPYAHRLLNKAKMLFKFAREHKGSFDGECPFYC SFSGYHDELLWAAAWLYSATRDRTYFKYVTEEALHAVVDEFNWDLKYAGVQILLSKSFFQGGRDMQAYKEHADSFICSALPQSPYHKIPMTPAGLVHLRD GANLQYATGISFLFSIYGDLLQRFNQKVQCGDKRFDSTHLLAFAKQQMDYILGQNPQGRSYMVGFGKNPPKQAHHRGASIPLSDANSEVNCPMSFVRWYN KNTPNPNELTGAILGGPDNHDNFNDERWSSVYTEPCTYINSVAVGALA |
Full Sequence |
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Protein Sequence Length: 486 Download |
MTRPSAAALV AWLAVLLGYV VVVNGDNFNY KEALTKSLIF LEAQRSGKLP PNHRVAWRGD 60 SCLNDGKEAN MDLVGGYYDA GDNVKYGLPM AFTVTTLAWS AIVYNSELKS AGELGNTQAA 120 IRWGTDYFLK AACKRNKLYV QVGDPEKEHQ CWVRPENMKH PRPVLEINEK TPGTEIAAET 180 SAALAASSIV FRRIDRPYAH RLLNKAKMLF KFAREHKGSF DGECPFYCSF SGYHDELLWA 240 AAWLYSATRD RTYFKYVTEE ALHAVVDEFN WDLKYAGVQI LLSKSFFQGG RDMQAYKEHA 300 DSFICSALPQ SPYHKIPMTP AGLVHLRDGA NLQYATGISF LFSIYGDLLQ RFNQKVQCGD 360 KRFDSTHLLA FAKQQMDYIL GQNPQGRSYM VGFGKNPPKQ AHHRGASIPL SDANSEVNCP 420 MSFVRWYNKN TPNPNELTGA ILGGPDNHDN FNDERWSSVY TEPCTYINSV AVGALAKLTR 480 PLPVK* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02266 | PLN02266 | 6.0e-162 | 26 | 480 | 466 | + endoglucanase | ||
PLN02171 | PLN02171 | 4.0e-163 | 29 | 478 | 465 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 1.0e-166 | 29 | 476 | 462 | + Glycosyl hydrolase family 9. | ||
PLN02613 | PLN02613 | 2.0e-180 | 26 | 478 | 456 | + endoglucanase | ||
PLN02909 | PLN02909 | 0 | 24 | 478 | 455 | + Endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB83158.1 | 0 | 20 | 478 | 25 | 480 | cellulase-like protein [Arabidopsis thaliana] |
EMBL | CAN82881.1 | 0 | 23 | 478 | 8 | 463 | hypothetical protein [Vitis vinifera] |
EMBL | CBI20730.1 | 0 | 1 | 472 | 4 | 475 | unnamed protein product [Vitis vinifera] |
EMBL | CBI20730.1 | 0 | 1 | 478 | 488 | 966 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189972.2 | 0 | 20 | 478 | 25 | 483 | AtGH9A4 (Arabidopsis thaliana Glycosyl Hydrolase 9A4); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 28 | 478 | 3 | 428 | A Chain A, Crystal Structure Of A Methyltransferase-Like Protein (Spo2022) From Silicibacter Pomeroyi Dss-3 At 1.80 A Resolution |
PDB | 1ksc_A | 0 | 28 | 478 | 3 | 428 | A Chain A, Crystal Structure Of A Methyltransferase-Like Protein (Spo2022) From Silicibacter Pomeroyi Dss-3 At 1.80 A Resolution |
PDB | 1ks8_A | 0 | 28 | 478 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2xfg_A | 0 | 28 | 480 | 24 | 461 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 4tf4_B | 0 | 28 | 480 | 4 | 442 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |