y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 346267 |
Family | GH9 |
Protein Properties | Length: 491 Molecular Weight: 53337.1 Isoelectric Point: 6.5723 |
Chromosome | Chromosome/Scaffold: 4 Start: 21723843 End: 21725602 |
Description | glycosyl hydrolase 9B10 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 33 | 487 | 0 |
NYGEALRNSLLYFEAQRSGKLPSNQRVTWRGDSALRDGSDAHIDLTGGYYDAGDNMKFGFPLAFTTTMLAWSNIEMASQLRAHHEKGNSLRALKWATDFL IKAHPEPNVLYGQVGEGNSDHKCWMRPEDMTTPRTSFRIDAQHPGSDLAGETAAAMAAASIAFAPSDKAYAQILIGHAKDLFAFAKAHRGVYQNSIPNAG GFYASSGYEDELLWAAAWLHRATNDQIYLDYLTQAETGGPRTVFAWDDKFVGAQVLVAKLALEGKVESSEEIVEYKSMAEQFICNCAQKGDNNVKKTPGG LLYFLPWNNLQYTTAATFVLSAYSKYLEAAKASINCPNGALQASDLLHLARSQVDYILGSNPKNMSYMVGVGTNYPKKPHHRAASIVSIHKDKTPVTCSG GFNAWYNNPAPNPNVLAGAVVGGPDDNDVYGDERTNFQQAEPATVTAAPLVGVLA |
Full Sequence |
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Protein Sequence Length: 491 Download |
MSQLKNGSSQ YLWTSICMVL LVMSMAREAV STNYGEALRN SLLYFEAQRS GKLPSNQRVT 60 WRGDSALRDG SDAHIDLTGG YYDAGDNMKF GFPLAFTTTM LAWSNIEMAS QLRAHHEKGN 120 SLRALKWATD FLIKAHPEPN VLYGQVGEGN SDHKCWMRPE DMTTPRTSFR IDAQHPGSDL 180 AGETAAAMAA ASIAFAPSDK AYAQILIGHA KDLFAFAKAH RGVYQNSIPN AGGFYASSGY 240 EDELLWAAAW LHRATNDQIY LDYLTQAETG GPRTVFAWDD KFVGAQVLVA KLALEGKVES 300 SEEIVEYKSM AEQFICNCAQ KGDNNVKKTP GGLLYFLPWN NLQYTTAATF VLSAYSKYLE 360 AAKASINCPN GALQASDLLH LARSQVDYIL GSNPKNMSYM VGVGTNYPKK PHHRAASIVS 420 IHKDKTPVTC SGGFNAWYNN PAPNPNVLAG AVVGGPDDND VYGDERTNFQ QAEPATVTAA 480 PLVGVLALVA * 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02613 | PLN02613 | 1.0e-157 | 18 | 473 | 464 | + endoglucanase | ||
PLN00119 | PLN00119 | 0 | 4 | 473 | 472 | + endoglucanase | ||
PLN02171 | PLN02171 | 0 | 14 | 473 | 470 | + endoglucanase | ||
PLN02340 | PLN02340 | 0 | 20 | 473 | 461 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 33 | 473 | 448 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 30 | 490 | 1 | 430 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 1ksc_A | 0 | 30 | 490 | 1 | 430 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 1ks8_A | 0 | 30 | 490 | 1 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 33 | 489 | 5 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 33 | 489 | 5 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |