y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.010G109200.2 |
Family | GH9 |
Protein Properties | Length: 402 Molecular Weight: 44553.6 Isoelectric Point: 8.8556 |
Chromosome | Chromosome/Scaffold: 10 Start: 12847531 End: 12851767 |
Description | glycosyl hydrolase 9B1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 1 | 395 | 0 |
MAFTTTLLSWSIIDFGRNMGPELKNAVKAVKWATDYLLKVTAVPNVVYVQLGDAYSDHNCWERPEDMDTLRTVYKIDGSHPGSDVAGETAAALAAASIVF RSRDPAYSRLLLNRAVRVFDFADSHRGAYSSSLHSAVCPFYCDVNGYQDELLWGAVWLHKASRRRRYREYIVKNEVILHAGDTINEFGWDNKHAGINVLI SKEVLMGRAEYFESFKHNADGFICSILPGISHSQVQYSPGGLIFKAGGSNMQHVTSLSFLFLAYSNYLSHANKAVPCGEKTASPALLKQLAKRQVDYILG DNPLRMSYMVGYGPRYPQRIHHRGSSLPSVRAHPARIRCKEGSRYFLSPNANPNVHVGAVVGGPNVTDAFPDSRPFFQESEPTTYINAPLVGLLA |
Full Sequence |
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Protein Sequence Length: 402 Download |
MAFTTTLLSW SIIDFGRNMG PELKNAVKAV KWATDYLLKV TAVPNVVYVQ LGDAYSDHNC 60 WERPEDMDTL RTVYKIDGSH PGSDVAGETA AALAAASIVF RSRDPAYSRL LLNRAVRVFD 120 FADSHRGAYS SSLHSAVCPF YCDVNGYQDE LLWGAVWLHK ASRRRRYREY IVKNEVILHA 180 GDTINEFGWD NKHAGINVLI SKEVLMGRAE YFESFKHNAD GFICSILPGI SHSQVQYSPG 240 GLIFKAGGSN MQHVTSLSFL FLAYSNYLSH ANKAVPCGEK TASPALLKQL AKRQVDYILG 300 DNPLRMSYMV GYGPRYPQRI HHRGSSLPSV RAHPARIRCK EGSRYFLSPN ANPNVHVGAV 360 VGGPNVTDAF PDSRPFFQES EPTTYINAPL VGLLAFFSTH P* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02613 | PLN02613 | 3.0e-153 | 1 | 395 | 399 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 1.0e-161 | 1 | 395 | 401 | + Glycosyl hydrolase family 9. | ||
PLN02308 | PLN02308 | 0 | 1 | 401 | 401 | + endoglucanase | ||
PLN02266 | PLN02266 | 0 | 1 | 398 | 398 | + endoglucanase | ||
PLN03009 | PLN03009 | 0 | 1 | 401 | 404 | + cellulase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ15175.1 | 0 | 1 | 400 | 96 | 495 | AF357588_1 endo-1,4-beta-glucanase isoform 02 [Fragaria x ananassa] |
GenBank | ABK92482.1 | 0 | 1 | 401 | 96 | 496 | unknown [Populus trichocarpa] |
RefSeq | XP_002311518.1 | 0 | 1 | 401 | 96 | 496 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315868.1 | 0 | 1 | 400 | 79 | 478 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527779.1 | 0 | 1 | 400 | 92 | 491 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 1 | 395 | 65 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1ksc_A | 0 | 1 | 395 | 65 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1ks8_A | 0 | 1 | 395 | 65 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 1 | 397 | 66 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 1 | 397 | 66 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO788388 | 400 | 4 | 400 | 0 |
DY296968 | 337 | 34 | 370 | 0 |
DW519687 | 295 | 72 | 366 | 0 |
ES903957 | 287 | 1 | 287 | 0 |
FC881523 | 284 | 34 | 317 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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