y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g047957m |
Family | CBM43 |
Protein Properties | Length: 212 Molecular Weight: 22993 Isoelectric Point: 6.8943 |
Chromosome | Chromosome/Scaffold: 00007 Start: 1419406 End: 1420562 |
Description | glycosyl hydrolase family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 133 | 210 | 3.9e-27 |
WCVAKPGSGEYILQQNINYACNYVDCSPTHDGGSCFNPTTLINHASFAMNLYYQTSAKNTASCDFRNSGLVVVNDPSK | |||
CBM43 | 36 | 117 | 1.4e-28 |
WCIANPLTNISALLGNLDFACSHVDCQLIQQGGSCFYPNTPIHHASFAMNLYFQVMGRHSSHCDFRGSGLISLTDPSYESCS |
Full Sequence |
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Protein Sequence Length: 212 Download |
MLKLPLSLRT TMCLLFLFIS FNSGGKLKMA SAQRTWCIAN PLTNISALLG NLDFACSHVD 60 CQLIQQGGSC FYPNTPIHHA SFAMNLYFQV MGRHSSHCDF RGSGLISLTD PSYESCSFHS 120 EGDLAEAPPS ATWCVAKPGS GEYILQQNIN YACNYVDCSP THDGGSCFNP TTLINHASFA 180 MNLYYQTSAK NTASCDFRNS GLVVVNDPSK S* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-15 | 35 | 104 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
pfam07983 | X8 | 3.0e-15 | 132 | 201 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-27 | 132 | 209 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
smart00768 | X8 | 1.0e-30 | 35 | 118 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC80125.1 | 3e-36 | 19 | 208 | 313 | 492 | putative beta-1,3-glucanase precursor [Oryza sativa Japonica Group] |
RefSeq | XP_002519721.1 | 0.000000000000002 | 24 | 112 | 102 | 190 | hypothetical protein RCOM_0633840 [Ricinus communis] |
RefSeq | XP_002519721.1 | 0 | 33 | 210 | 2 | 191 | hypothetical protein RCOM_0633840 [Ricinus communis] |
RefSeq | XP_002519722.1 | 0 | 10 | 209 | 6 | 210 | hypothetical protein RCOM_0633850 [Ricinus communis] |
RefSeq | XP_002519722.1 | 7e-25 | 34 | 118 | 132 | 216 | hypothetical protein RCOM_0633850 [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 8e-22 | 32 | 120 | 9 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 2jon_A | 1e-18 | 130 | 209 | 10 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |