y
Basic Information | |
---|---|
Species | Citrus sinensis |
Cazyme ID | orange1.1g048472m |
Family | CBM43 |
Protein Properties | Length: 164 Molecular Weight: 18541.2 Isoelectric Point: 5.5568 |
Chromosome | Chromosome/Scaffold: 00070 Start: 256676 End: 257688 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 77 | 159 | 1.1e-25 |
WCIAKPSTGDERLNANIQFCCQQPDIDCSIIQPGGRSYNPNNYYSHASVVMHLYYKANYKLPHTCDFMQSGLIISQDPSVGEC |
Full Sequence |
---|
Protein Sequence Length: 164 Download |
MAKQLSAFVL LLLIIFLLSS TMATVLSLKC FERSEITCNI FISLQPRYHQ QMKANWEQAT 60 DTPNLDDKVS WEGQTTWCIA KPSTGDERLN ANIQFCCQQP DIDCSIIQPG GRSYNPNNYY 120 SHASVVMHLY YKANYKLPHT CDFMQSGLII SQDPSVGECI YEP* 180 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-12 | 76 | 143 | 73 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-24 | 76 | 161 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001042566.1 | 3e-23 | 72 | 161 | 33 | 120 | Os01g0243700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002273170.1 | 9e-25 | 74 | 162 | 43 | 131 | PREDICTED: similar to At2g43670 [Vitis vinifera] |
RefSeq | XP_002320265.1 | 1e-20 | 74 | 161 | 45 | 132 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519703.1 | 3e-22 | 72 | 161 | 36 | 124 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
RefSeq | XP_002528491.1 | 3e-20 | 74 | 161 | 31 | 116 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-18 | 76 | 161 | 12 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |