y
Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.198190.1 |
Family | CBM43 |
Protein Properties | Length: 206 Molecular Weight: 20717.3 Isoelectric Point: 6.4707 |
Chromosome | Chromosome/Scaffold: 01357 Start: 1301967 End: 1305298 |
Description | plasmodesmata callose-binding protein 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 25 | 106 | 2.8e-32 |
WCVCRDGLADTVLQKTLDFACGAGADCVPIHQNGGCYLPNTVKAHCSFATNSYFQRKGQAPGSCDFSGTAAVTTSDPSISGC |
Full Sequence |
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Protein Sequence Length: 206 Download |
MSWVMPALAI GLLILAMTGH SSATWCVCRD GLADTVLQKT LDFACGAGAD CVPIHQNGGC 60 YLPNTVKAHC SFATNSYFQR KGQAPGSCDF SGTAAVTTSD PSISGCAYPS SASPVNSGTI 120 PVTGTPTTTN PGNGLTPTTN TPFGSTTPTG VLGGNGFGSG NNNGLEPSGV GGMNTDYNSG 180 SRLQLTLIAN VVGFLFTLLL CGHMV* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-22 | 24 | 94 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-38 | 24 | 108 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92735.1 | 0 | 5 | 113 | 1 | 108 | unknown [Populus trichocarpa] |
RefSeq | NP_564059.1 | 0 | 5 | 200 | 1 | 178 | PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3); callose binding / polysaccharide binding [Arabidopsis thaliana] |
RefSeq | XP_002284112.1 | 0 | 5 | 205 | 1 | 204 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002328640.1 | 0 | 5 | 111 | 1 | 106 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514663.1 | 0 | 5 | 205 | 1 | 212 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 4e-21 | 18 | 110 | 6 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |