y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.A01020.2 |
Family | CBM43 |
Protein Properties | Length: 152 Molecular Weight: 16487.5 Isoelectric Point: 6.864 |
Chromosome | Chromosome/Scaffold: 1 Start: 15849509 End: 15850662 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 46 | 125 | 4.7e-28 |
WCIAKPSTDNDRLHHNIDYSCRLSGVNCELIQVGGSCFQPDNAVSHASVAMNLYYKAAGKHHWDCHFNGSAIIVTADPSL |
Full Sequence |
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Protein Sequence Length: 152 Download |
MAATRKSITL LPIALAILLS VTARIDSRTF DNEGKPQDAN ETGAAWCIAK PSTDNDRLHH 60 NIDYSCRLSG VNCELIQVGG SCFQPDNAVS HASVAMNLYY KAAGKHHWDC HFNGSAIIVT 120 ADPSLNDVGN SRSAVSRIRI YKHSNFEETL D* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 8.0e-14 | 46 | 117 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-27 | 46 | 124 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAB64039.1 | 3e-28 | 35 | 124 | 24 | 111 | putative beta-1,3-glucanase, C terminal fragment [Arabidopsis thaliana] |
GenBank | AAT41831.1 | 5e-28 | 35 | 124 | 23 | 110 | At2g43670 [Arabidopsis thaliana] |
RefSeq | XP_002273170.1 | 7e-39 | 1 | 125 | 1 | 125 | PREDICTED: similar to At2g43670 [Vitis vinifera] |
RefSeq | XP_002320265.1 | 9e-33 | 39 | 126 | 41 | 128 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515203.1 | 2e-37 | 1 | 123 | 1 | 129 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-21 | 36 | 125 | 3 | 91 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |