y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 918444 |
Family | CBM43 |
Protein Properties | Length: 112 Molecular Weight: 12105.8 Isoelectric Point: 6.1952 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 28 | 108 | 4.9e-30 |
WCSAMPSSTAEQLQSNINFACNHVDCSPIQPGGFCYYPNTLLEHASFVMNLYYTSQDRIASACSFGNTGYISYSDPSAGTC |
Full Sequence |
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Protein Sequence Length: 112 Download |
MSSQLLTLLF LLSAAVIYHI PVVTCRTWCS AMPSSTAEQL QSNINFACNH VDCSPIQPGG 60 FCYYPNTLLE HASFVMNLYY TSQDRIASAC SFGNTGYISY SDPSAGTCGR L* 120 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 7.0e-18 | 27 | 97 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-32 | 27 | 108 | 83 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001078361.1 | 1e-31 | 1 | 108 | 4 | 112 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_001078788.1 | 2e-35 | 1 | 108 | 1 | 106 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_200172.1 | 0 | 1 | 108 | 1 | 109 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
RefSeq | NP_200173.1 | 0 | 1 | 108 | 1 | 108 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
RefSeq | NP_201128.2 | 3e-32 | 20 | 108 | 18 | 107 | unknown protein [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 7e-21 | 27 | 108 | 12 | 94 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |