y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma05g25840.1 |
Family | CBM43 |
Protein Properties | Length: 123 Molecular Weight: 13171.1 Isoelectric Point: 6.4551 |
Chromosome | Chromosome/Scaffold: 05 Start: 31902565 End: 31903717 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 38 | 119 | 6e-28 |
WCVAKPSTIDVALNDNIQYGCIALGDCKMIQPGGSCFYPNTLLNHASVVMNQYYAANGRNTWNCFFSGSGLFVVSDPSYANC |
Full Sequence |
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Protein Sequence Length: 123 Download |
MAKSTGSLVF LSIFTLLLSC NLGGHLKFAN GMLDQESWCV AKPSTIDVAL NDNIQYGCIA 60 LGDCKMIQPG GSCFYPNTLL NHASVVMNQY YAANGRNTWN CFFSGSGLFV VSDPSYANCT 120 YA* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 6.0e-14 | 37 | 107 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-29 | 37 | 121 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU14756.1 | 0 | 1 | 122 | 1 | 122 | unknown [Glycine max] |
RefSeq | NP_001042566.1 | 9e-29 | 23 | 121 | 26 | 120 | Os01g0243700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002285661.1 | 9e-29 | 23 | 122 | 19 | 114 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002519703.1 | 4e-30 | 24 | 121 | 30 | 124 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
RefSeq | XP_002528491.1 | 6e-30 | 1 | 122 | 1 | 117 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 1e-23 | 37 | 121 | 12 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |