y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.010G158900.1 |
Family | CBM43 |
Protein Properties | Length: 218 Molecular Weight: 21770.1 Isoelectric Point: 6.4526 |
Chromosome | Chromosome/Scaffold: 10 Start: 16517964 End: 16520382 |
Description | plasmodesmata callose-binding protein 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 22 | 100 | 1.8e-30 |
CICKDGVGDTQLQKSLDYACGAGADCTQIIQNAPCYQPNTVKDHCSYAVNSYFQKKGQAVGSCDFSGTAMTSATPPQSK |
Full Sequence |
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Protein Sequence Length: 218 Download |
MAVLVFLGLF LALTGHSSAT YCICKDGVGD TQLQKSLDYA CGAGADCTQI IQNAPCYQPN 60 TVKDHCSYAV NSYFQKKGQA VGSCDFSGTA MTSATPPQSK SSVASGCTYP ASATPSTGTG 120 NTPTTTTPST GTTPTGTGTT PTGTGTGTST GTGTGTGTGT GTPSSIIPTP PSSVFNSGLG 180 PTGFNDNSSE APAFKGTNLW FIASLTLLFS GIFLFWG* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-21 | 20 | 91 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-32 | 20 | 97 | 78 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU14053.1 | 0 | 1 | 120 | 1 | 115 | unknown [Glycine max] |
GenBank | ACU20773.1 | 0 | 1 | 120 | 1 | 115 | unknown [Glycine max] |
EMBL | CAN73948.1 | 0 | 1 | 217 | 1 | 193 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311337.1 | 0 | 1 | 217 | 1 | 184 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002316090.1 | 0 | 1 | 217 | 1 | 214 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 8e-16 | 14 | 97 | 6 | 89 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |