y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g043079m |
Family | CBM43 |
Protein Properties | Length: 461 Molecular Weight: 50507.8 Isoelectric Point: 6.7829 |
Chromosome | Chromosome/Scaffold: 00066 Start: 120191 End: 121957 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 377 | 459 | 2.7e-30 |
WCVPKTGADIEALQRNIDYVCGMGFNCEAIQEGGSCFLPNTVRAHAAYAMNVYYQAMGRHDYACDFIQTGAVTDLDPSYGKCK | |||
GH17 | 31 | 345 | 0 |
IGVNYGTVANNLPPPTHVAHFLLESTIINRVRLFDADPKMIRAFAHTGIAVTVTVPNDQIPYLTKLNFAEQWLKNNIQPYTPATNIVRIFVGNEILSTAS KLLIASLVPAMQTLHTALVGVSLDRRIQVSTPHSLGILSSSSPPSSGKFHQGYDIHVLKPLLSFLRATKSPFLINPYPFFGCSPETLDYALFRPNSGVFD ENTKIVYTNMLDGQLDAVFSAMKLLGFDDVEIVIAETGWPSKGDSSQVGVDSQSAADYNMNLMRHVTSGNGTPLMPNRTFETYIFALFNEDLKQGPTCER NFGLFHPNMTPVYDV |
Full Sequence |
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Protein Sequence Length: 461 Download |
MDKAQIPLPT FTILLLVVVS ISLIHGSEGS IGVNYGTVAN NLPPPTHVAH FLLESTIINR 60 VRLFDADPKM IRAFAHTGIA VTVTVPNDQI PYLTKLNFAE QWLKNNIQPY TPATNIVRIF 120 VGNEILSTAS KLLIASLVPA MQTLHTALVG VSLDRRIQVS TPHSLGILSS SSPPSSGKFH 180 QGYDIHVLKP LLSFLRATKS PFLINPYPFF GCSPETLDYA LFRPNSGVFD ENTKIVYTNM 240 LDGQLDAVFS AMKLLGFDDV EIVIAETGWP SKGDSSQVGV DSQSAADYNM NLMRHVTSGN 300 GTPLMPNRTF ETYIFALFNE DLKQGPTCER NFGLFHPNMT PVYDVGILRS TARSSIPTSN 360 PTPKVETPQR APEGKRWCVP KTGADIEALQ RNIDYVCGMG FNCEAIQEGG SCFLPNTVRA 420 HAAYAMNVYY QAMGRHDYAC DFIQTGAVTD LDPSYGKCKY * 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-21 | 376 | 442 | 72 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-38 | 377 | 460 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-80 | 31 | 345 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI23036.1 | 0 | 15 | 460 | 8 | 458 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002271991.1 | 0 | 8 | 458 | 1 | 477 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318439.1 | 0 | 12 | 460 | 15 | 463 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321390.1 | 0 | 30 | 454 | 1 | 419 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526252.1 | 0 | 1 | 454 | 1 | 466 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 31 | 345 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 31 | 345 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 31 | 345 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 31 | 345 | 2 | 313 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 31 | 345 | 2 | 313 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |