y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g037583m |
Family | CBM43 |
Protein Properties | Length: 505 Molecular Weight: 54401.2 Isoelectric Point: 8.1876 |
Chromosome | Chromosome/Scaffold: 00014 Start: 277317 End: 279932 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 382 | 463 | 3.6e-32 |
WCVPKSDASDAALQANIDYVCGTGVDCKPIQAGGPCFNPNNVRSHAAYAMNAFYQANGLHDYACDFNKTGVLTSADPSYEAC | |||
GH17 | 32 | 344 | 0 |
IGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPAAQSWVANNILPHHPQTIFRYIVLGNEILATSD KVLIASLLPAMRTLKSALDAANLSSVQVSTPHSLGILSTSEPPSTGRFRKGYDRLIFARILEFHRQTKSPFMVNPYPYFGFKPQTLNYALFKPNAGVFDP ATGKNYTNMFDAQLDAVYSAMKKVGYEDVDIVVGETGWPSAGDPNQPESNLANALSYNGNLVKHVNSGKGTPLMPNRTFEVYIFALFNENLKPSISEQNF GLFKPDFTPVYDV |
Full Sequence |
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Protein Sequence Length: 505 Download |
MAATVTKLSQ FLLFLFLSLS CNAITPSAAD SIGVNYGAIA NNLPPPQQVA NFLKTQTTID 60 RVKLFDANPE FLRAFAHTNI PVTVTVGNGD IPALAKLPAA QSWVANNILP HHPQTIFRYI 120 VLGNEILATS DKVLIASLLP AMRTLKSALD AANLSSVQVS TPHSLGILST SEPPSTGRFR 180 KGYDRLIFAR ILEFHRQTKS PFMVNPYPYF GFKPQTLNYA LFKPNAGVFD PATGKNYTNM 240 FDAQLDAVYS AMKKVGYEDV DIVVGETGWP SAGDPNQPES NLANALSYNG NLVKHVNSGK 300 GTPLMPNRTF EVYIFALFNE NLKPSISEQN FGLFKPDFTP VYDVGILRNK QAQGPAKAPG 360 GRPPTEAPVA KPPSGAVTGR KWCVPKSDAS DAALQANIDY VCGTGVDCKP IQAGGPCFNP 420 NNVRSHAAYA MNAFYQANGL HDYACDFNKT GVLTSADPSY EACDYTHVEG KALKLEKSVA 480 GISTGLCTVI EIIVVAFIQL LFLI* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.005 | 108 | 337 | 237 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 4.0e-24 | 381 | 452 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-40 | 381 | 465 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 6.0e-93 | 32 | 344 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95730.1 | 0 | 27 | 465 | 24 | 447 | unknown [Populus trichocarpa] |
RefSeq | XP_002283647.1 | 0 | 10 | 465 | 7 | 445 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002298356.1 | 0 | 27 | 459 | 22 | 447 | glycoside hydrolase [Populus trichocarpa] |
RefSeq | XP_002312097.1 | 0 | 27 | 465 | 24 | 447 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532848.1 | 0 | 27 | 486 | 20 | 463 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 32 | 344 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 32 | 344 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 32 | 344 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 0 | 32 | 344 | 3 | 312 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 0 | 32 | 344 | 3 | 312 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |