y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g011390m |
Family | CBM43 |
Protein Properties | Length: 488 Molecular Weight: 52665.8 Isoelectric Point: 5.8826 |
Chromosome | Chromosome/Scaffold: 00002 Start: 4719220 End: 4720900 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 400 | 482 | 7.9e-32 |
WCVAKPHADEKVLQSVLDFCCGPGGVDCREIDRSGGCFEPEKLHAHASYAMNAYYQMHGRNYWNCDFKGTGLVTFSDPSYGTC | |||
GH17 | 37 | 373 | 0 |
VGINYGTLGNNLPSPKKVAQLLQSTIIDKVKIYDTNPEILEAFANTGIDLIVAVENYHVSNISTDTASADEWLSTRVLPFLPATSVVAIVVGNEYLTADG NQMMRMNPKALVQAMQNMHAALLARGLERKIKVTTPHSMAVLASSFPPSASTFAPDITPTMTSILAFLADTGAPFMVNAYPYFAYRDNPSSVNLEYALLG GSAGVGINASSSGSGGGLYAVHDPKGYVYTNMLDAQIDAVRTAINGLGFGNRSIKITVSESGWPSKGDSAATPENAKTYNTRLIERAQSNKGTPMRPKEN IEVFVFALFNENKKEGGVSERNFGIFNGDGSKVYQVD |
Full Sequence |
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Protein Sequence Length: 488 Download |
MVPPPPLQLC FTPQLPVLLL FLFLLLILSP SQNVAGVGIN YGTLGNNLPS PKKVAQLLQS 60 TIIDKVKIYD TNPEILEAFA NTGIDLIVAV ENYHVSNIST DTASADEWLS TRVLPFLPAT 120 SVVAIVVGNE YLTADGNQMM RMNPKALVQA MQNMHAALLA RGLERKIKVT TPHSMAVLAS 180 SFPPSASTFA PDITPTMTSI LAFLADTGAP FMVNAYPYFA YRDNPSSVNL EYALLGGSAG 240 VGINASSSGS GGGLYAVHDP KGYVYTNMLD AQIDAVRTAI NGLGFGNRSI KITVSESGWP 300 SKGDSAATPE NAKTYNTRLI ERAQSNKGTP MRPKENIEVF VFALFNENKK EGGVSERNFG 360 IFNGDGSKVY QVDLSCQFCS DDEMTFEKIS SGVSRGPSVW CVAKPHADEK VLQSVLDFCC 420 GPGGVDCREI DRSGGCFEPE KLHAHASYAM NAYYQMHGRN YWNCDFKGTG LVTFSDPSYG 480 TCRYSQQ* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-5 | 288 | 365 | 85 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-19 | 400 | 470 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-36 | 400 | 484 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-92 | 37 | 373 | 337 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40742.1 | 0 | 34 | 487 | 46 | 485 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_001761806.1 | 0 | 23 | 478 | 18 | 451 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002272900.1 | 0 | 34 | 487 | 21 | 460 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300634.1 | 0 | 29 | 374 | 12 | 341 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510704.1 | 0 | 32 | 487 | 18 | 458 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 37 | 374 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 37 | 374 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 37 | 374 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghr_A | 0 | 37 | 374 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1aq0_B | 0 | 37 | 374 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |