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Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna20016.1-v1.0-hybrid |
Family | GT47 |
Protein Properties | Length: 490 Molecular Weight: 54859.8 Isoelectric Point: 7.8442 |
Chromosome | Chromosome/Scaffold: 3 Start: 7579534 End: 7581754 |
Description | Exostosin family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 100 | 413 | 0 |
AVKVYLHDLPTRFTYGIIEQHSLARGGRPADDVSSLKYPGHQHMGEWYLFKDLLKPESDRVGSPVARVLDPDEADLFYVPFFSSLSLIVNTNRQAAGSGE RPGYSDEENQEALVEWLEAQEYWKRNNGRDHVIMASDPNALYKILDLVKNAVLLVCDFGRLKPDQGSLVKDVIVPYSHRINTYTGDISVENRNTLLFFMG NRFRKEGGKIRNLLFQLLENEEDVIVKHGTQSRESRRAATHGMHTSKFCLNPAGDTPSACRLFDSIVSLCVPVIISDSIELPFEDVVDYRKIAIFVESNT ALRPGFLVSMLREI |
Full Sequence |
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Protein Sequence Length: 490 Download |
MSTTELLRFS KKPKASLPSS PDDHRHSLNP TRFLSMARNK SSLIKQTLAA IVFVIVLYAF 60 LNTFLSPAAV SPALPSFSTI SDAVVPDLIA LPSSAVAPAA VKVYLHDLPT RFTYGIIEQH 120 SLARGGRPAD DVSSLKYPGH QHMGEWYLFK DLLKPESDRV GSPVARVLDP DEADLFYVPF 180 FSSLSLIVNT NRQAAGSGER PGYSDEENQE ALVEWLEAQE YWKRNNGRDH VIMASDPNAL 240 YKILDLVKNA VLLVCDFGRL KPDQGSLVKD VIVPYSHRIN TYTGDISVEN RNTLLFFMGN 300 RFRKEGGKIR NLLFQLLENE EDVIVKHGTQ SRESRRAATH GMHTSKFCLN PAGDTPSACR 360 LFDSIVSLCV PVIISDSIEL PFEDVVDYRK IAIFVESNTA LRPGFLVSML REITSERILE 420 YQKELNEVKH YFQYGVPNGS VNEIWRQVAQ KLPFIKLSIN RDKRLVKRDL KVPDCSCVCS 480 NQTGIITSL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-76 | 102 | 413 | 323 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |