y
Basic Information | |
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Species | Aquilegia coerulea |
Cazyme ID | Aquca_023_00060.1 |
Family | GT47 |
Protein Properties | Length: 429 Molecular Weight: 49256.4 Isoelectric Point: 8.225 |
Chromosome | Chromosome/Scaffold: 23 Start: 2051066 End: 2055476 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 1 | 352 | 0 |
YLADLPNSFNYDLLTQYWSFTSDSRIGSDVDNDLRRNIRLSRSNFSSLMANFHFPPYPENPIIKQYSAEYWILGDLMTPQELRRSSFAKRVFDYHDADVV FVPFFATLSAEMQLIKGKSVFRKKVNENEDYVRQKNLMDLIRSSEAWKRSGGRDHVFVLTDPVAMWHVRDEIAPAILLVVDFGGWYRLDSKASNDSSSNM IQHTQVSLLKDVILPYTHLLPRLHLPENQNRRTLLYFKGAKHRHRGGVVREKLWDLLIDERDVVMEEGFPNATGKEQSIKGMRSSEFCLHPAGDTPTSCR LFDAILSLCIPVIVSDDIELPFEGMVDYSDFSIFVPVSDALQPNWLIRHLRS |
Full Sequence |
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Protein Sequence Length: 429 Download |
YLADLPNSFN YDLLTQYWSF TSDSRIGSDV DNDLRRNIRL SRSNFSSLMA NFHFPPYPEN 60 PIIKQYSAEY WILGDLMTPQ ELRRSSFAKR VFDYHDADVV FVPFFATLSA EMQLIKGKSV 120 FRKKVNENED YVRQKNLMDL IRSSEAWKRS GGRDHVFVLT DPVAMWHVRD EIAPAILLVV 180 DFGGWYRLDS KASNDSSSNM IQHTQVSLLK DVILPYTHLL PRLHLPENQN RRTLLYFKGA 240 KHRHRGGVVR EKLWDLLIDE RDVVMEEGFP NATGKEQSIK GMRSSEFCLH PAGDTPTSCR 300 LFDAILSLCI PVIVSDDIEL PFEGMVDYSD FSIFVPVSDA LQPNWLIRHL RSFSKFQKDA 360 LRQSMAHIQP IFEYDNGHPG GIGPVPPDGA VNHVWKKVYQ KLPMIKEAIV REKRKPKGVS 420 VPLRCHCT* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-56 | 55 | 353 | 311 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_564443.1 | 0 | 1 | 427 | 60 | 476 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002270238.1 | 0 | 1 | 428 | 66 | 440 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002325567.1 | 0 | 1 | 428 | 59 | 476 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002327326.1 | 0 | 1 | 428 | 32 | 449 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002533317.1 | 0 | 1 | 428 | 58 | 478 | catalytic, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FC929411 | 272 | 158 | 429 | 0 |
DY305235 | 272 | 158 | 429 | 0 |
DY305110 | 271 | 159 | 429 | 0 |
DY305010 | 267 | 159 | 425 | 0 |
FC929752 | 257 | 159 | 415 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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