y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10031600m |
Family | GT47 |
Protein Properties | Length: 432 Molecular Weight: 50001.2 Isoelectric Point: 8.0509 |
Chromosome | Chromosome/Scaffold: 4 Start: 21336406 End: 21339653 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 54 | 361 | 0 |
PLRVYMYDLPRRFHVGMLDHSSPDGLPVTSENLPRWPRSSGIKRQHSVEYWLMASLLYDGESEEREAVRVSDPDTAQAFFVPFFSSLSFNTHGHNMTDPD TEFDRQLQIEILEFLRNSKYWQKSGGRDHVIPMTHPNAFRFLRQQLNASILIVADFGRYPRSMSNLSKDVVAPYVHVVESFTDDNPPDPFVARKTLLFFQ GNTIRKDEGKVRAKLAKILTGYDDVHYERSAPTTKSIKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIK EAGQPGYM |
Full Sequence |
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Protein Sequence Length: 432 Download |
MEHREISKMF EKAILSLIFL LLLVITYSVF IGTVDIRSHF FPLLQSTAQS CSAPLRVYMY 60 DLPRRFHVGM LDHSSPDGLP VTSENLPRWP RSSGIKRQHS VEYWLMASLL YDGESEEREA 120 VRVSDPDTAQ AFFVPFFSSL SFNTHGHNMT DPDTEFDRQL QIEILEFLRN SKYWQKSGGR 180 DHVIPMTHPN AFRFLRQQLN ASILIVADFG RYPRSMSNLS KDVVAPYVHV VESFTDDNPP 240 DPFVARKTLL FFQGNTIRKD EGKVRAKLAK ILTGYDDVHY ERSAPTTKSI KESTEGMRSS 300 KFCLHPAGDT PSSCRLFDAI VSHCVPVIVS DRIELPFEDE IDYSEFSVFF SIKEAGQPGY 360 MIDQLRQIPK ARWIEMWQRL KSISHYYEFQ YPPKKEDAVN MVWRQVKNKI PGVQLAVHRH 420 RRLKIPDWWS I* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-71 | 51 | 357 | 315 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC18793.1 | 0 | 9 | 410 | 1 | 440 | End is cut off [Arabidopsis thaliana] |
RefSeq | NP_176908.2 | 0 | 9 | 429 | 1 | 429 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002272591.1 | 0 | 35 | 429 | 27 | 426 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311068.1 | 0 | 54 | 429 | 1 | 380 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512333.1 | 0 | 33 | 429 | 25 | 431 | catalytic, putative [Ricinus communis] |