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Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000245563 |
Family | GT47 |
Protein Properties | Length: 523 Molecular Weight: 59883.3 Isoelectric Point: 10.0166 |
Chromosome | Chromosome/Scaffold: 021640121 Start: 6015 End: 10465 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 133 | 451 | 0 |
LLRVFMYELPPEFHFGLLGWKGKENQTWPNVKNLSLIPAYPGGLNLQHSIEYWLTLDLLSSSIPTVVRPCTVVRVHNSSQADVIFVPFFASLXYNRHSKL RGNEEVSVNKKLQGKLVQYLMGRDEWKRKGGKDHLLVAHHPNSMLDARKKLGSAMFVLADFGRYSAEIANLEKDIIAPYRHLVMTVQSSKSPSFNERPIL LYFRGAIYRKDGGMVRKKLXYLLKDEKDVNFTFGSVQGHGINKASQGMASSKFCLNLAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSQFCIF VRSSYACKKGYLLNLLRGI |
Full Sequence |
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Protein Sequence Length: 523 Download |
MRIEGILERK DVDAPFPIKV LAELLKNPNN AIYHSLSCSG YDFKRDREIM VFFXEXQGFM 60 CMFKLVVLNG TYFEPLVKSR DKNLPSFSSE VPRVDAKGST KRCELGCQVS NSSKKLGFLE 120 KKKMVACDST QALLRVFMYE LPPEFHFGLL GWKGKENQTW PNVKNLSLIP AYPGGLNLQH 180 SIEYWLTLDL LSSSIPTVVR PCTVVRVHNS SQADVIFVPF FASLXYNRHS KLRGNEEVSV 240 NKKLQGKLVQ YLMGRDEWKR KGGKDHLLVA HHPNSMLDAR KKLGSAMFVL ADFGRYSAEI 300 ANLEKDIIAP YRHLVMTVQS SKSPSFNERP ILLYFRGAIY RKDGGMVRKK LXYLLKDEKD 360 VNFTFGSVQG HGINKASQGM ASSKFCLNLA GDTPSSNRLF DAIASHCVPV IISDEIELPF 420 EDVLDYSQFC IFVRSSYACK KGYLLNLLRG IKQETWTKMW ERLKEVVHHF GYQYPSQPGD 480 AVDMIWQAVS HKKSSTQFKF HSRQFKFHRK KRYDRSTSGI RTK 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-50 | 134 | 433 | 309 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD55303.1 | 0 | 113 | 518 | 55 | 457 | AC008263_34 F25A4.34 [Arabidopsis thaliana] |
RefSeq | XP_002284930.1 | 0 | 111 | 516 | 50 | 448 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002284932.1 | 0 | 104 | 516 | 4 | 409 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
RefSeq | XP_002320639.1 | 0 | 134 | 515 | 3 | 374 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514760.1 | 0 | 62 | 515 | 43 | 486 | catalytic, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY972226 | 280 | 213 | 492 | 0 |
FG607579 | 294 | 209 | 501 | 0 |
DV152455 | 246 | 234 | 479 | 0 |
EY669441 | 260 | 172 | 431 | 0 |
DT576757 | 261 | 241 | 501 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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