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Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_362407g0010 |
Family | GT47 |
Protein Properties | Length: 183 Molecular Weight: 21253.6 Isoelectric Point: 9.1545 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 43 | 116 | 1.5e-32 |
QAKQGMRSSRFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYQEFSLFFSVKEALRPGYLMQKL |
Full Sequence |
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Protein Sequence Length: 183 Download |
MIFSNHLLGG SYTDPGGSGS GSGDPRFLHL PPADPFVLPF AFQAKQGMRS SRFCLHPAGD 60 TPSSCRLFDA IVSHCVPVIV SDRIELPFED EIDYQEFSLF FSVKEALRPG YLMQKLETFP 120 KEKWLKMWNK LKQVAHHFEY QYPPIKDDAV NMLWRQIHRK LPAVNLAIHR TKRLKIPDWW 180 ERR 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 7.0e-25 | 46 | 116 | 71 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK24530.1 | 0 | 44 | 183 | 307 | 446 | unknown [Picea sitchensis] |
GenBank | ACN31886.1 | 0 | 48 | 180 | 1 | 133 | unknown [Zea mays] |
RefSeq | NP_001152546.1 | 0 | 44 | 180 | 290 | 426 | exostosin-like [Zea mays] |
RefSeq | NP_176908.2 | 0 | 44 | 180 | 293 | 429 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002456855.1 | 0 | 44 | 180 | 295 | 431 | hypothetical protein SORBIDRAFT_03g044100 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GW729426 | 140 | 44 | 183 | 0 |
DR509786 | 140 | 44 | 183 | 0 |
CO478776 | 140 | 44 | 183 | 0 |
GW773399 | 140 | 44 | 183 | 0 |
DR119215 | 140 | 44 | 183 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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