y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb08g019670.1 |
Family | GH17 |
Protein Properties | Length: 331 Molecular Weight: 34308.5 Isoelectric Point: 4.2285 |
Chromosome | Chromosome/Scaffold: 8 Start: 50600146 End: 50601817 |
Description | beta-1,3-glucanase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 27 | 329 | 0 |
IGVCYGTQGDGLPSAADVVQLYQSKGIGAMRIYSPDATILQALRGSGIDVIVDETNLDALISDAGSWVQANVQPYIGDVKFKYIAVGNEVEGSDTQKILP AMQSLAGALSAAGFGDIKVSTAVKMSVLATSSPPSSGAFKDSSVMGPVVRFLAGSGAPLLANVYPYFAYRDAGGSIDLGFSLFEQSSTTVNDDGHVYTNL FDAMADAIYSAMEKEGESGVPIVVSESGWPSDGGGLGASVDNAQTYNQNLINHVGNGTPKRSGPLETYIFAMFNENKKQGDETEKHFGLFNGQDKSPVYP ISF |
Full Sequence |
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Protein Sequence Length: 331 Download |
MASVLAATAL LIGALALASI PTAVQSIGVC YGTQGDGLPS AADVVQLYQS KGIGAMRIYS 60 PDATILQALR GSGIDVIVDE TNLDALISDA GSWVQANVQP YIGDVKFKYI AVGNEVEGSD 120 TQKILPAMQS LAGALSAAGF GDIKVSTAVK MSVLATSSPP SSGAFKDSSV MGPVVRFLAG 180 SGAPLLANVY PYFAYRDAGG SIDLGFSLFE QSSTTVNDDG HVYTNLFDAM ADAIYSAMEK 240 EGESGVPIVV SESGWPSDGG GLGASVDNAQ TYNQNLINHV GNGTPKRSGP LETYIFAMFN 300 ENKKQGDETE KHFGLFNGQD KSPVYPISFS * 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-6 | 39 | 320 | 295 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-135 | 27 | 329 | 313 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD87992.1 | 0 | 22 | 329 | 56 | 360 | putative beta-1,3-glucanase precursor [Oryza sativa Japonica Group] |
DDBJ | BAF07274.2 | 0 | 22 | 329 | 11 | 315 | Os01g0941500 [Oryza sativa Japonica Group] |
GenBank | EEC72145.1 | 0 | 7 | 329 | 11 | 328 | hypothetical protein OsI_05175 [Oryza sativa Indica Group] |
GenBank | EEE55993.1 | 0 | 7 | 329 | 11 | 328 | hypothetical protein OsJ_04741 [Oryza sativa Japonica Group] |
RefSeq | XP_002442416.1 | 0 | 25 | 330 | 25 | 330 | hypothetical protein SORBIDRAFT_08g019670 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 27 | 329 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 27 | 329 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghr_A | 0 | 27 | 329 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1aq0_B | 0 | 27 | 329 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 27 | 329 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |