y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.010G142800.2 |
Family | GH17 |
Protein Properties | Length: 332 Molecular Weight: 36288.1 Isoelectric Point: 8.5951 |
Chromosome | Chromosome/Scaffold: 10 Start: 15420940 End: 15423504 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 1 | 309 | 0 |
MMGNNLPPATEVIALYKQHNIKRMRLYDPNQAALNALRDSGIEVMLGVPNSDLQRLSNPSDANSWVKNNVLNFWPSVKFRYIAVGNEISPVNGGTSWMAP FVLPALVNVFNAVRAAGLQDQIKVSIAVDMTLIGTSYPPSAGAFRGDVISYLAPIVGHLSYAKTPLFANIYTYFSYSGNPRDISLPYSLFTSPSVLVWDS GRGYQNLFDAMLDSLYSALERLGGGNTLDVVVSESGWPSAGGFGTTSDNAGTYLSNLIRHVKGGTPKRPGKAIETYIFAMFDENQKQPELEKHFGAFSPN KQPKYNLNF |
Full Sequence |
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Protein Sequence Length: 332 Download |
MMGNNLPPAT EVIALYKQHN IKRMRLYDPN QAALNALRDS GIEVMLGVPN SDLQRLSNPS 60 DANSWVKNNV LNFWPSVKFR YIAVGNEISP VNGGTSWMAP FVLPALVNVF NAVRAAGLQD 120 QIKVSIAVDM TLIGTSYPPS AGAFRGDVIS YLAPIVGHLS YAKTPLFANI YTYFSYSGNP 180 RDISLPYSLF TSPSVLVWDS GRGYQNLFDA MLDSLYSALE RLGGGNTLDV VVSESGWPSA 240 GGFGTTSDNA GTYLSNLIRH VKGGTPKRPG KAIETYIFAM FDENQKQPEL EKHFGAFSPN 300 KQPKYNLNFG GHRNWDISTE QNVTVSLKSD M* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-5 | 24 | 301 | 294 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-153 | 1 | 309 | 311 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAP87281.1 | 0 | 1 | 331 | 44 | 374 | beta-1,3-glucanase [Hevea brasiliensis] |
GenBank | ABK96486.1 | 0 | 1 | 331 | 42 | 372 | unknown [Populus trichocarpa x Populus deltoides] |
GenBank | ACZ74626.1 | 0 | 2 | 331 | 45 | 374 | beta-1,3-glucanase [Hevea brasiliensis] |
RefSeq | XP_002314934.1 | 0 | 1 | 331 | 26 | 356 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002314939.1 | 0 | 1 | 310 | 1 | 310 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 1 | 309 | 8 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_C | 0 | 1 | 309 | 8 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_B | 0 | 1 | 309 | 8 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_A | 0 | 1 | 309 | 8 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3em5_D | 0 | 1 | 309 | 8 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT515134 | 255 | 78 | 332 | 0 |
CF936074 | 256 | 1 | 256 | 0 |
CV280531 | 245 | 88 | 332 | 0 |
DV465931 | 242 | 1 | 242 | 0 |
DT503453 | 243 | 1 | 243 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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