y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10003621m |
Family | GH17 |
Protein Properties | Length: 317 Molecular Weight: 34572.6 Isoelectric Point: 6.799 |
Chromosome | Chromosome/Scaffold: 6 Start: 6979896 End: 6980846 |
Description | beta-1,3-glucanase 5 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 5 | 315 | 0 |
IGLNYGLLGDNLPSPSNVISLYKSIGITKIRIFDPNTDVLNALRNHQDIGVTVGVKNQDLAALAASQEAVKVWFATNIEPYLADVNITFITVGNEVIPGE IGPQVLPVMKSLTNLVKSRNLSILISTVVAMSNLGQSYPPSKAMFTPQGREQLVPVLKFLSQKNTPILVNIYPYFAYASNPVNISLDYAIFNTKHVVVED GLMKYSNLFDAIFDAFVWAMEKEGVKNLSMVVSETGWPSAGNGNLTTPDIAATYNRNFVKHVESGIGTPKRPNCSIQGFLFATFNENQKPAGTEQNFGLY NPTDMKPIYTL |
Full Sequence |
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Protein Sequence Length: 317 Download |
AATNIGLNYG LLGDNLPSPS NVISLYKSIG ITKIRIFDPN TDVLNALRNH QDIGVTVGVK 60 NQDLAALAAS QEAVKVWFAT NIEPYLADVN ITFITVGNEV IPGEIGPQVL PVMKSLTNLV 120 KSRNLSILIS TVVAMSNLGQ SYPPSKAMFT PQGREQLVPV LKFLSQKNTP ILVNIYPYFA 180 YASNPVNISL DYAIFNTKHV VVEDGLMKYS NLFDAIFDAF VWAMEKEGVK NLSMVVSETG 240 WPSAGNGNLT TPDIAATYNR NFVKHVESGI GTPKRPNCSI QGFLFATFNE NQKPAGTEQN 300 FGLYNPTDMK PIYTLF* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0002 | 231 | 305 | 81 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-105 | 5 | 315 | 314 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM62473.1 | 0 | 1 | 316 | 30 | 345 | beta-1,3-glucanase bg4 [Arabidopsis thaliana] |
RefSeq | NP_174592.1 | 0 | 1 | 316 | 30 | 335 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
RefSeq | NP_197533.1 | 0 | 1 | 316 | 30 | 345 | BETAG4; catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_197534.1 | 0 | 1 | 316 | 39 | 354 | BG5 (beta-1,3-glucanase 5); glucan 1,3-beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_197539.1 | 0 | 1 | 316 | 29 | 344 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 5 | 315 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 5 | 310 | 2 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 5 | 310 | 2 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 5 | 310 | 2 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 5 | 310 | 2 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EE454654 | 184 | 1 | 184 | 0 |
DC899652 | 327 | 1 | 316 | 0 |
DY278959 | 311 | 2 | 307 | 0 |
BU103698 | 313 | 4 | 315 | 0 |
DY932502 | 306 | 5 | 306 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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