y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.016G135900.1 |
Family | GH17 |
Protein Properties | Length: 244 Molecular Weight: 26816.1 Isoelectric Point: 4.1153 |
Chromosome | Chromosome/Scaffold: 16 Start: 13920294 End: 13921402 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 1 | 240 | 0 |
NGITNVRIFDIDATTLKSLSGTGINVMVDIPNEDLPSLATGTLNFSLEWLQSNIFSNIPTAQVKYIAVGNEVFLKDPFYTPYYIKLSSPQAASVLSLSYP PSSTAFDPYLHSVMIPLMKFLHDTGSPFMVNEHISLDYALFRNQNVAQDGGFLYANLLDASVDAFAYAMEREGFQGIKIVVSETGWATGGGEAASVANAM AYNENVVRRVANYVGTPRQPNEEMEVYLFDLFDENEKNGE |
Full Sequence |
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Protein Sequence Length: 244 Download |
NGITNVRIFD IDATTLKSLS GTGINVMVDI PNEDLPSLAT GTLNFSLEWL QSNIFSNIPT 60 AQVKYIAVGN EVFLKDPFYT PYYIKLSSPQ AASVLSLSYP PSSTAFDPYL HSVMIPLMKF 120 LHDTGSPFMV NEHISLDYAL FRNQNVAQDG GFLYANLLDA SVDAFAYAME REGFQGIKIV 180 VSETGWATGG GEAASVANAM AYNENVVRRV ANYVGTPRQP NEEMEVYLFD LFDENEKNGE 240 EFT* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 4.0e-54 | 1 | 241 | 269 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA82271.1 | 0 | 2 | 242 | 54 | 324 | beta-1,3-glucanase [Nicotiana tabacum] |
EMBL | CAN59926.1 | 0 | 1 | 242 | 46 | 317 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_001063767.1 | 0 | 1 | 242 | 58 | 330 | Os09g0533200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002264917.1 | 0 | 1 | 242 | 47 | 318 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002525370.1 | 0 | 1 | 242 | 59 | 308 | Glucan endo-1,3-beta-glucosidase, acidic isoform precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 1 | 239 | 25 | 291 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 3.99931e-42 | 1 | 240 | 27 | 293 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 3.99931e-42 | 1 | 240 | 27 | 293 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 3.99931e-42 | 1 | 240 | 27 | 293 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 3.99931e-42 | 1 | 240 | 27 | 293 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY274271 | 273 | 1 | 242 | 0 |
FC899645 | 264 | 1 | 233 | 0 |
DY276945 | 254 | 1 | 223 | 0 |
FC915319 | 240 | 1 | 209 | 0 |
DY267081 | 275 | 1 | 241 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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