y
Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT1G77790.1 |
Family | GH17 |
Protein Properties | Length: 347 Molecular Weight: 37889.1 Isoelectric Point: 4.4581 |
Chromosome | Chromosome/Scaffold: 1 Start: 29250692 End: 29251976 |
Description | glycosyl hydrolases family 17, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 31 | 341 | 0 |
GDCYGRNGNNLPTPADTVALYKSNNIDAIRMYEPFADMLEALRGSGLLVAFGPRNEDIQSLAHDPAAATNFVSTWITPYQNDVAIKWITIGNEVFPGEIA QFVAAAIKNVNVALTNSGVTGISVTTVLAMTALTNTYPPSAATFLPDLTEIMTEITSILSETNSPLMTNIYPYFAYASDPYHISLDYASFKSNTPVVIDG DLYYNNMFEAMVDGFNAALEKINAANVVVMVAETGWPTEGNPPHTSVDNAKAYNMGIRTCGRSAERKRTPRRQNTPVDVFLFAMFKENQKDGPVEQSFGI FAPDMTPVYDL |
Full Sequence |
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Protein Sequence Length: 347 Download |
MDSKLIRFAV VIMLLSIQIF CTAGVAGDIT GDCYGRNGNN LPTPADTVAL YKSNNIDAIR 60 MYEPFADMLE ALRGSGLLVA FGPRNEDIQS LAHDPAAATN FVSTWITPYQ NDVAIKWITI 120 GNEVFPGEIA QFVAAAIKNV NVALTNSGVT GISVTTVLAM TALTNTYPPS AATFLPDLTE 180 IMTEITSILS ETNSPLMTNI YPYFAYASDP YHISLDYASF KSNTPVVIDG DLYYNNMFEA 240 MVDGFNAALE KINAANVVVM VAETGWPTEG NPPHTSVDNA KAYNMGIRTC GRSAERKRTP 300 RRQNTPVDVF LFAMFKENQK DGPVEQSFGI FAPDMTPVYD LFCKWR* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0002 | 95 | 334 | 273 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-95 | 31 | 343 | 316 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0012505 | endomembrane system |
GO:0043169 | cation binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN05912.1 | 0 | 6 | 343 | 4 | 318 | Glycoside hydrolase, family 17 [Medicago truncatula] |
GenBank | ABN05913.1 | 0 | 8 | 343 | 10 | 337 | Glycoside hydrolase, family 17 [Medicago truncatula] |
RefSeq | NP_177901.1 | 0 | 8 | 342 | 2 | 333 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_177902.1 | 0 | 1 | 346 | 1 | 346 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002306606.1 | 0 | 31 | 342 | 1 | 309 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 31 | 341 | 2 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 31 | 341 | 3 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 31 | 341 | 3 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 31 | 341 | 3 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 31 | 341 | 3 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |