y
Basic Information | |
---|---|
Species | Arabidopsis thaliana |
Cazyme ID | AT5G20330.1 |
Family | GH17 |
Protein Properties | Length: 346 Molecular Weight: 37684.1 Isoelectric Point: 8.3221 |
Chromosome | Chromosome/Scaffold: 5 Start: 6871561 End: 6873112 |
Description | glycosyl hydrolases family 17, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 34 | 344 | 0 |
IGLNYGLLGDNLPSPSNVINLYKSIGISRIRIFDPNTEVLNALRGHRDIEVTVGVKDQDLAALAASEEAVKGWFAANIESYLADVNITFITVGNEVIPGP IGPQVLPVMQSLTNLVKSRNLPISISTVVAMSNLEQSYPPSAGMFTSQAREQLVPVLKLLSQTSTPILVNIYPYFAYASDPANIRLDYASFNTKSIVVQD GSLGYSNMFDAIFDAFVWAMEKEGVKNLPMVVSETGWPSAGNGNFTTPAIASTYNRNFVKHIASGKGTPKRPNKSMNGFLFATFNENQKPAGTEQNFGLY NPSDMKPIYKL |
Full Sequence |
---|
Protein Sequence Length: 346 Download |
MLYSPKKLFL FFLSCIVLYV NSNNSGFVTA ANSIGLNYGL LGDNLPSPSN VINLYKSIGI 60 SRIRIFDPNT EVLNALRGHR DIEVTVGVKD QDLAALAASE EAVKGWFAAN IESYLADVNI 120 TFITVGNEVI PGPIGPQVLP VMQSLTNLVK SRNLPISIST VVAMSNLEQS YPPSAGMFTS 180 QAREQLVPVL KLLSQTSTPI LVNIYPYFAY ASDPANIRLD YASFNTKSIV VQDGSLGYSN 240 MFDAIFDAFV WAMEKEGVKN LPMVVSETGW PSAGNGNFTT PAIASTYNRN FVKHIASGKG 300 TPKRPNKSMN GFLFATFNEN QKPAGTEQNF GLYNPSDMKP IYKLF* 360 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0002 | 260 | 337 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 7.0e-103 | 34 | 344 | 314 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0003824 | catalytic activity |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0012505 | endomembrane system |
GO:0043169 | cation binding |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM62473.1 | 0 | 1 | 345 | 1 | 345 | beta-1,3-glucanase bg4 [Arabidopsis thaliana] |
RefSeq | NP_174592.1 | 0 | 1 | 345 | 1 | 335 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
RefSeq | NP_197533.1 | 0 | 1 | 345 | 1 | 345 | BETAG4; catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_197534.1 | 0 | 1 | 345 | 1 | 354 | BG5 (beta-1,3-glucanase 5); glucan 1,3-beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_197539.1 | 0 | 6 | 345 | 5 | 344 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 34 | 344 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 34 | 339 | 2 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 34 | 339 | 2 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 34 | 339 | 2 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 34 | 339 | 2 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |