y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 488942 |
Family | GH17 |
Protein Properties | Length: 346 Molecular Weight: 37729.3 Isoelectric Point: 5.1188 |
Chromosome | Chromosome/Scaffold: 6 Start: 8625643 End: 8626777 |
Description | beta-1,3-glucanase 4 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 34 | 344 | 0 |
IGLNYGLLGDNLPSPSNVINLYKSIGITKIRIFDPNTEVLNALRGHRDIEVTVGVKDQDLAALAASEEAVKGWFAANIESYLADVNIAFITIGNEVIPGP IGPQVLPVMQSLTNLVKSRNLPILISTVVAMSNLEQSYPPSAGMFTSQAREQLVPVLKLLSQTSTPILVNIYPYFPYASDPVNIPLNYATFNTEAILVQD GPLGYSNMFEAIFDAFVWAMEKEGVKDLPMVVSETGWPSAGNGNFTTPDIASTYNRNFVRHIASGKGTPKRPNKGIDGFLFATFNENQKPVGTEQNFGLY NPSDMKPIYKL |
Full Sequence |
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Protein Sequence Length: 346 Download |
MLYLPKKLFL FLSCIVMLSV NYNNSASVTA ANSIGLNYGL LGDNLPSPSN VINLYKSIGI 60 TKIRIFDPNT EVLNALRGHR DIEVTVGVKD QDLAALAASE EAVKGWFAAN IESYLADVNI 120 AFITIGNEVI PGPIGPQVLP VMQSLTNLVK SRNLPILIST VVAMSNLEQS YPPSAGMFTS 180 QAREQLVPVL KLLSQTSTPI LVNIYPYFPY ASDPVNIPLN YATFNTEAIL VQDGPLGYSN 240 MFEAIFDAFV WAMEKEGVKD LPMVVSETGW PSAGNGNFTT PDIASTYNRN FVRHIASGKG 300 TPKRPNKGID GFLFATFNEN QKPVGTEQNF GLYNPSDMKP IYKLF* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-6 | 262 | 337 | 82 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-102 | 34 | 344 | 314 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 34 | 344 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 34 | 339 | 2 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 34 | 339 | 2 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 34 | 339 | 2 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 34 | 339 | 2 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |